RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 REPS1Q96D71 796 aa19.06■□□□□ 0.64
CSNK1E-207ENST00000430335 MMABQ96EY8 250 aaPredicted RBP19.06■□□□□ 0.64
CSNK1E-207ENST00000430335 SMIM10Q96HG1 83 aa19.06■□□□□ 0.64
CSNK1E-207ENST00000430335 STMN4Q9H169 189 aaPredicted RBP19.06■□□□□ 0.64
CSNK1E-207ENST00000430335 CENPHQ9H3R5 247 aa19.06■□□□□ 0.64
CSNK1E-207ENST00000430335 PRORYQ9H606 182 aa19.06■□□□□ 0.64
CSNK1E-207ENST00000430335 WDR54Q9H977 334 aa19.06■□□□□ 0.64
CSNK1E-207ENST00000430335 OXSMQ9NWU1 459 aa19.06■□□□□ 0.64
CSNK1E-207ENST00000430335 TCFL5Q9UL49 500 aa19.06■□□□□ 0.64
CSNK1E-207ENST00000430335 RNF11Q9Y3C5 154 aa19.06■□□□□ 0.64
CSNK1E-207ENST00000430335 MRPS18BQ9Y676 258 aaKnown RBP19.06■□□□□ 0.64
CSNK1E-207ENST00000430335 IGLV3-12A0A075B6K2 115 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 LRIT2A6NDA9 550 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 CREG1O75629 220 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 KLF7O75840 302 aaPredicted RBP19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 MLYCDO95822 493 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 IL1RNP18510 177 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 PIK3CBP42338 1070 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 SKP1P63208 163 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 CXADRP78310 365 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 LIPMQ5VYY2 423 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 ADNP2Q6IQ32 1131 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 RPS27LQ71UM5 84 aaKnown RBP19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 MILR1Q7Z6M3 343 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 MYLK4Q86YV6 388 aaPredicted RBP19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 AMER3Q8N944 861 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 OR9A4Q8NGU2 314 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 TRPC4APQ8TEL6 797 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 ZNF473Q8WTR7 871 aaKnown RBP19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 FAM111AQ96PZ2 611 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 CDK15Q96Q40 435 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 AICDAQ9GZX7 198 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 SLC17A7Q9P2U7 560 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 NXT1Q9UKK6 140 aaKnown RBP19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 STK38LQ9Y2H1 464 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 MAP4K5Q9Y4K4 846 aa19.05■□□□□ 0.64
CSNK1E-207ENST00000430335 GOLGA6L10A6NI86 522 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 VSTM2BA6NLU5 285 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 CNOT3O75175 753 aaKnown RBP19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 KLHL18O94889 574 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 ZNF888P0CJ79 500 aaPredicted RBP19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 RPS18P62269 152 aaKnown RBP19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 PCLAFQ15004 111 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 RBBP7Q16576 425 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 NKG7Q16617 165 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 CPSF6Q16630 551 aaKnown RBP eCLIP19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 COL28A1Q2UY09 1125 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 TOR1AIP1Q5JTV8 583 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 C10orf62Q5T681 223 aaPredicted RBP19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 PRSS41Q7RTY9 318 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 PDSS2Q86YH6 399 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 OR4F6Q8NGB9 312 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 OR2Y1Q8NGV0 311 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 WDR20Q8TBZ3 569 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 CCT6BQ92526 530 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 GAL3ST3Q96A11 431 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 MS4A6EQ96DS6 147 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 ZNF382Q96SR6 550 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 GSTO2Q9H4Y5 243 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 KLHL31Q9H511 634 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 CLK4Q9HAZ1 481 aaKnown RBP19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 TMBIM4Q9HC24 238 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 PSD3Q9NYI0 1048 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 ZNF282Q9UDV7 671 aaPredicted RBP19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 TRPS1Q9UHF7 1281 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 NAALAD2Q9Y3Q0 740 aa19.04■□□□□ 0.64
CSNK1E-207ENST00000430335 PPP6CO00743 305 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 NKX2-8O15522 239 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 GALR3O60755 368 aaPredicted RBP19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 PCNAP12004 261 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 TSPAN8P19075 237 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 HNRNPH1P31943 449 aaKnown RBP19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 ARL1P40616 181 aaPredicted RBP19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 ETV4P43268 484 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 NAGLUP54802 743 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 LCP2Q13094 533 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 ZRSR2Q15696 482 aaKnown RBP19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 C19orf48Q6RUI8 117 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 HDXQ7Z353 690 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 C10orf107Q8IVU9 208 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 OR2L5Q8NG80 312 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 HUS1BQ8NHY5 278 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 SPSB2Q99619 263 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 MS4A8Q9BY19 250 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 TGIF2Q9GZN2 237 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 REXO4Q9GZR2 422 aaKnown RBP19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 MKKSQ9NPJ1 570 aaPredicted RBP19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 CTSFQ9UBX1 484 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 ZNF225Q9UK10 706 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 PPT2Q9UMR5 302 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 CFAP47Q6ZTR5 3102 aa19.03■□□□□ 0.64
CSNK1E-207ENST00000430335 A0A1B0GTL3 188 aa19.02■□□□□ 0.64
CSNK1E-207ENST00000430335 SGK494L7N484 410 aa19.02■□□□□ 0.64
CSNK1E-207ENST00000430335 AGPSO00116 658 aa19.02■□□□□ 0.64
CSNK1E-207ENST00000430335 FOXE1O00358 373 aaPredicted RBP19.02■□□□□ 0.64
CSNK1E-207ENST00000430335 TM9SF1O15321 606 aa19.02■□□□□ 0.64
CSNK1E-207ENST00000430335 TRIM13O60858 407 aa19.02■□□□□ 0.64
CSNK1E-207ENST00000430335 FOLR3P41439 243 aa19.02■□□□□ 0.64
CSNK1E-207ENST00000430335 PKNOX1P55347 436 aa19.02■□□□□ 0.64
CSNK1E-207ENST00000430335 RAB8AP61006 207 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms