RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ALPPL2P10696 532 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 MSX2P35548 267 aaPredicted RBP9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 VHLP40337 213 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 CASP2P42575 452 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 GALNT1Q10472 559 aaPredicted RBP9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 ERV3-1Q14264 604 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 KPNB1Q14974 876 aaKnown RBP9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 ARHGAP19Q14CB8 494 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 KIAA0040Q15053 153 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 TBCCQ15814 346 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 CACHD1Q5VU97 1274 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 LAIR1Q6GTX8 287 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZNF425Q6IV72 752 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 ARMC6Q6NXE6 501 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 DNAJC14Q6Y2X3 702 aaPredicted RBP9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 FUNDC1Q8IVP5 155 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 LIX1Q8N485 282 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 ABHD11Q8NFV4 315 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 CREB3L4Q8TEY5 395 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 MAELQ96JY0 434 aaKnown RBP9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 OR2A5Q96R48 311 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 CCDC106Q9BWC9 280 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 TMEM121BQ9BXQ6 578 aaPredicted RBP9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 RHBGQ9H310 441 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 IRAK4Q9NWZ3 460 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 SPATA7Q9P0W8 599 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 DHCR7Q9UBM7 475 aaKnown RBP9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 FTSJ1Q9UET6 329 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 TRPS1Q9UHF7 1281 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 TMEM184BQ9Y519 407 aaPredicted RBP9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 EME2A4GXA9 379 aaPredicted RBP9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 KLHL33A6NCF5 533 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 ANKDD1BA6NHY2 528 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 OR5K4A6NMS3 321 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 UBDO15205 165 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 ERI3O43414 337 aaKnown RBP9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 JRKO75564 520 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZNF888P0CJ79 500 aaPredicted RBP9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 ITIH1P19827 911 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 CERS1P27544 350 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 NDUFS1P28331 727 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 CMPK1P30085 196 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 PDX1P52945 283 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 MAT1AQ00266 395 aaKnown RBP9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 TBL3Q12788 808 aaKnown RBP9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 ILF2Q12905 390 aaKnown RBP9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 PROX2Q3B8N5 592 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 VPS26BQ4G0F5 336 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 PHF19Q5T6S3 580 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 LIPJQ5W064 366 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 DHRS13Q6UX07 377 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 SHISA6Q6ZSJ9 500 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 COMMD6Q7Z4G1 85 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 C11orf74Q86VG3 221 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 PDSS2Q86YH6 399 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 ARHGAP24Q8N264 748 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 DEFB124Q8NES8 71 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 OR4K1Q8NGD4 311 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 FAM174AQ8TBP5 190 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 WDR60Q8WVS4 1066 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 SLC13A3Q8WWT9 602 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 MCUR1Q96AQ8 359 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 NPAS2Q99743 824 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 SIKE1Q9BRV8 207 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZNF717Q9BY31 904 aaPredicted RBP9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 ANKRA2Q9H9E1 313 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 TEX10Q9NXF1 929 aaPredicted RBP9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 ERVK-11Q9UQG0 969 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 FAM227AF5H4B4 570 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 H0YIV9 168 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 TMPRSS11DO60235 418 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 KRT36O76013 467 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 KRT6AP02538 564 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 KRT6BP04259 564 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 SERPINA6P08185 405 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 BCKDHAP12694 445 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 CCL4P13236 92 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 SDC1P18827 310 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 KRT6CP48668 564 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 REEP5Q00765 189 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 ID2Q02363 134 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 SLC34A1Q06495 639 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 FOXM1Q08050 763 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 KIR2DS3Q14952 304 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 RCN1Q15293 331 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 NR0B2Q15466 257 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 ATP6AP1LQ52LC2 224 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 AGKQ53H12 422 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 CDKL4Q5MAI5 379 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 C1orf189Q5VU69 101 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 PRSS58Q8IYP2 241 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 RAB42Q8N4Z0 105 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 RNF148Q8N7C7 305 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 SLC38A9Q8NBW4 561 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 OR7A2PQ8NGA2 310 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 BAHD1Q8TBE0 780 aaPredicted RBP9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 NRG4Q8WWG1 115 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 DNAJC9Q8WXX5 260 aa9.07□□□□□ -0.96
HMGCLL1-206ENST00000428842 AIF1LQ9BQI0 150 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms