RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 SLCO6A1Q86UG4 719 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZFAND4Q86XD8 727 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 GPR135Q8IZ08 494 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 C1orf52Q8N6N3 182 aaKnown RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 KCT2Q8NC54 265 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 OR2L5Q8NG80 312 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 OR1L3Q8NH93 324 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 CDC26Q8NHZ8 85 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 NT5CQ8TCD5 201 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 BCAS4Q8TDM0 211 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 ACTRT2Q8TDY3 377 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 C10orf82Q8WW14 230 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 GAL3ST3Q96A11 431 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 MARK4Q96L34 752 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 OR52B2Q96RD2 323 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 CMKLR1Q99788 373 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 SORBS1Q9BX66 1292 aaKnown RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 EBPLQ9BY08 206 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 SLC6A16Q9GZN6 736 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 AKTIPQ9H8T0 292 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 COPS7BQ9H9Q2 264 aaPredicted RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 C1orf109Q9NX04 203 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 SIDT1Q9NXL6 827 aaKnown RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 AHSPQ9NZD4 102 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 RARRES3Q9UL19 164 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 G3BP2Q9UN86 482 aaKnown RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 CLCA2Q9UQC9 943 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 RUVBL1Q9Y265 456 aaKnown RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 LOXL2Q9Y4K0 774 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 CCL27Q9Y4X3 112 aa7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 POLR3HQ9Y535 204 aaPredicted RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 ARHGEF17Q96PE2 2063 aaPredicted RBP7.54□□□□□ -1.2
HMGA1P4-201ENST00000428643 PTPRZ1P23471 2315 aaPredicted RBP7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 A0A088AWK7 358 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 GNG14A0A1W2PPG7 69 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 ARHGAP10A1A4S6 786 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 SERTM1A2A2V5 107 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 HYKKA2RU49 373 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 LRIT2A6NDA9 550 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZNF860A6NHJ4 632 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 RTCAO00442 366 aaKnown RBP7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 PLPP1O14494 284 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 TM4SF5O14894 197 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 UBDO15205 165 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 PCDH7O60245 1069 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 GBAP04062 536 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 MSL3P1P0C860 447 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 ATXN8OSP0DMR3 200 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZNF10P21506 573 aaPredicted RBP7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 SDHBP21912 280 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 PRPH2P23942 346 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 CERS1P27544 350 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 MAPK1P28482 360 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 ERVK-8P63133 956 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 SKP1P63208 163 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 BTN3A2P78410 334 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 TBL3Q12788 808 aaKnown RBP7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 MAD2L1Q13257 205 aaPredicted RBP7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 NDUFA9Q16795 377 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 PRTGQ2VWP7 1150 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 ADPRMQ3LIE5 342 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 LSM12Q3MHD2 195 aaKnown RBP7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 DEFB134Q4QY38 66 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 C6orf136Q5SQH8 315 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 DEPDC1Q5TB30 811 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 TMEM198Q66K66 360 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 TMEM214Q6NUQ4 689 aaKnown RBP7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 FOXR1Q6PIV2 292 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 Q6ZSR9 355 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 PAGE2Q7Z2X7 111 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 NUDT13Q86X67 352 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 TMEM126BQ8IUX1 230 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 CACNA2D3Q8IZS8 1091 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 ANKS4BQ8N8V4 417 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 CCDC197Q8NCU1 140 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 SRFBP1Q8NEF9 429 aaKnown RBP7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 OR8K5Q8NH50 307 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 CEP70Q8NHQ1 597 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 STON2Q8WXE9 905 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 RGMAQ96B86 450 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 MS4A6EQ96DS6 147 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 TM4SF19Q96DZ7 209 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 RNF31Q96EP0 1072 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 APIPQ96GX9 242 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 MAELQ96JY0 434 aaKnown RBP7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 ZNF285Q96NJ3 590 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 CATSPER2Q96P56 530 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 QRFPRQ96P65 431 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 KCNC2Q96PR1 638 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 CTRCQ99895 268 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 NDC1Q9BTX1 674 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 CCDC28BQ9BUN5 200 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 SLC7A5P2Q9GIP4 190 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 SPRTNQ9H040 489 aaPredicted RBP7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 KLHL31Q9H511 634 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 KCNK13Q9HB14 408 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 ANKHQ9HCJ1 492 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 OCIAD1Q9NX40 245 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 PSD3Q9NYI0 1048 aa7.53□□□□□ -1.2
HMGA1P4-201ENST00000428643 NOP53Q9NZM5 478 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms