RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 MEIOBQ8N635 442 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 CANT1Q8WVQ1 401 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 RFKQ969G6 155 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 TMED9Q9BVK6 235 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 CCNB1IP1Q9NPC3 277 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 TMEM59LQ9UK28 342 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 MAFFQ9ULX9 164 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 CA5BQ9Y2D0 317 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.4□□□□□ -0.9
SNX13-203ENST00000428135 FAM170BA6NMN3 283 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 J3QLW9 94 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 J3QRK9 145 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 HCRTR2O43614 444 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 MRPL3P09001 348 aaKnown RBP9.4□□□□□ -0.9
SNX13-203ENST00000428135 ZNF19P17023 458 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 XRCC1P18887 633 aaPredicted RBP9.4□□□□□ -0.9
SNX13-203ENST00000428135 AOC1P19801 751 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 PBX2P40425 430 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 CDKN2DP55273 166 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 BNIP1Q12981 228 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 METTL21CQ5VZV1 264 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 C2CD4AQ8NCU7 369 aaPredicted RBP9.4□□□□□ -0.9
SNX13-203ENST00000428135 C3orf58Q8NDZ4 430 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 MSLNLQ96KJ4 702 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 ZNF641Q96N77 438 aaPredicted RBP9.4□□□□□ -0.9
SNX13-203ENST00000428135 GPR22Q99680 433 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 DERL2Q9GZP9 239 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 EHD1Q9H4M9 534 aa9.4□□□□□ -0.9
SNX13-203ENST00000428135 STOX2Q9P2F5 926 aaPredicted RBP9.4□□□□□ -0.9
SNX13-203ENST00000428135 SEC14L5O43304 696 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 RNF13O43567 381 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 APOL3O95236 402 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 IL1RNP18510 177 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 EDNRAP25101 427 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 TBPL1P62380 186 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 SCN1BQ07699 218 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 ELAVL3Q14576 367 aaKnown RBP9.4□□□□□ -0.91
SNX13-203ENST00000428135 CDH24Q86UP0 819 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 CEP97Q8IW35 865 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 ARMC10Q8N2F6 343 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 CLCC1Q96S66 551 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 CGREF1Q99674 301 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 LRRC3Q9BY71 257 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 CPEB1Q9BZB8 566 aaKnown RBP9.4□□□□□ -0.91
SNX13-203ENST00000428135 IL1RAPQ9NPH3 570 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 PDLIM7Q9NR12 457 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 PCDHGA3Q9Y5H0 932 aa9.4□□□□□ -0.91
SNX13-203ENST00000428135 N4BP2Q86UW6 1770 aaPredicted RBP9.39□□□□□ -0.91
SNX13-203ENST00000428135 PRORSD1PA6NEY8 169 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 SLC16A5O15375 505 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 GP1BBP13224 206 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 ARSDP51689 593 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 HHEXQ03014 270 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 NIPAL4Q0D2K0 466 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 TRAP1Q12931 704 aaKnown RBP9.39□□□□□ -0.91
SNX13-203ENST00000428135 CBFBQ13951 182 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 FLYWCH1Q4VC44 716 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 ARSJQ5FYB0 599 aaPredicted RBP9.39□□□□□ -0.91
SNX13-203ENST00000428135 RNF220Q5VTB9 566 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 OR8K3Q8NH51 312 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 SLC22A8Q8TCC7 542 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 RHBDD1Q8TEB9 315 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 MACROD1Q9BQ69 325 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 FAM83CQ9BQN1 747 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 ARPC2O15144 300 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 COQ9O75208 318 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 CSTF1Q05048 431 aaKnown RBP9.39□□□□□ -0.91
SNX13-203ENST00000428135 NANOGNBQ7Z5D8 188 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 ZZZ3Q8IYH5 903 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 YIPF7Q8N8F6 280 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 AQP11Q8NBQ7 271 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 CCDC54Q8NEL0 328 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 LMO3Q8TAP4 145 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 ZDHHC1Q8WTX9 485 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 FRMD6Q96NE9 622 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 OR1F2PQ96R84 312 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 TM9SF2Q99805 663 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 SLC17A9Q9BYT1 436 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 C5AR2Q9P296 337 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 MYH10P35580 1976 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 FAM172BPA6NC97 362 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 DUX1O43812 170 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 ZNF623O75123 536 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 PGRP06401 933 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 RAP2AP10114 183 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 ZNF3P17036 446 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 SHMT2P34897 504 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 MAP3K8P41279 467 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 SLC6A11P48066 632 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 C1orf220Q5T0J3 134 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 DUS1LQ6P1R4 473 aaKnown RBP9.39□□□□□ -0.91
SNX13-203ENST00000428135 FIGNL1Q6PIW4 674 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 FRMD7Q6ZUT3 714 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 AMIGO1Q86WK6 493 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 C1orf74Q96LT6 269 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 ADAMTS5Q9UNA0 930 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 SPIN1Q9Y657 262 aaPredicted RBP9.39□□□□□ -0.91
SNX13-203ENST00000428135 ADAM12O43184 909 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 GJB3O75712 270 aa9.39□□□□□ -0.91
SNX13-203ENST00000428135 GPIP06744 558 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms