RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 TSSK6Q9BXA6 273 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 NANOGQ9H9S0 305 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 SLC39A1Q9NY26 324 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 PI15O43692 258 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 GJA1P17302 382 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 IL12BP29460 328 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 MASP1P48740 699 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 AGTR2P50052 363 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 CYBRD1Q53TN4 286 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 SLC25A25Q6KCM7 469 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 LYSMD3Q7Z3D4 306 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF101Q8IZC7 436 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 KLK6Q92876 244 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 ZUFSPQ96AP4 578 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 SIGLEC10Q96LC7 697 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 HEPHQ9BQS7 1158 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 TAS2R10Q9NYW0 307 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 GSKIPQ9P0R6 139 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 IRAK2O43187 625 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 GSTT2P0CG29 244 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 C6orf141Q5SZD1 244 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 LRRN1Q6UXK5 716 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 TIFABQ6ZNK6 161 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 CLDN19Q8N6F1 224 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 TUBA1CQ9BQE3 449 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 TAS2R9Q9NYW1 312 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF451Q9Y4E5 1061 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 TACSTD2P09758 323 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 SRCP12931 536 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 IL7P13232 177 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 GSTM3P21266 225 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 MAT2AP31153 395 aaKnown RBP14.03□□□□□ -0.16
PTPRU-204ENST00000428026 MAGEA8P43361 318 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 ABHD18Q0P651 414 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 SLC35F1Q5T1Q4 408 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 ALG1LQ6GMV1 187 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 OR2AJ1Q8NGZ0 328 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 RFT1Q96AA3 541 aa14.03□□□□□ -0.16
PTPRU-204ENST00000428026 JSRP1Q96MG2 331 aaPredicted RBP14.03□□□□□ -0.16
PTPRU-204ENST00000428026 HCRTO43612 131 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 OR2B3O76000 313 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 CSKP41240 450 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 MLLT1Q03111 559 aaPredicted RBP14.02□□□□□ -0.16
PTPRU-204ENST00000428026 ATP6AP1Q15904 470 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 NDUFA9Q16795 377 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 TMEM151AQ8N4L1 468 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 SAMD12Q8N8I0 201 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 C16orf70Q9BSU1 422 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 OR51I1Q9H343 314 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 TAS2R3Q9NYW6 316 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 CDC14AQ9UNH5 594 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 B3GALT2O43825 422 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 FAM189A1O60320 539 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 MT-ND2P03891 347 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 PRNPP04156 253 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 MPIP34949 423 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 HTR2BP41595 481 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 NRIP1P48552 1158 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 SNRPD2P62316 118 aaKnown RBP14.02□□□□□ -0.16
PTPRU-204ENST00000428026 CEACAM7Q14002 265 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 ZNF678Q5SXM1 525 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 MBOAT1Q6ZNC8 495 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 SYVN1Q86TM6 617 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 DPCDQ9BVM2 203 aaPredicted RBP14.02□□□□□ -0.16
PTPRU-204ENST00000428026 MRPS30Q9NP92 439 aaKnown RBP14.02□□□□□ -0.16
PTPRU-204ENST00000428026 UBQLN2Q9UHD9 624 aa14.02□□□□□ -0.16
PTPRU-204ENST00000428026 A0A0J9YVX5 310 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 SOCS2O14508 198 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 EEF1E1O43324 174 aaKnown RBP14.02□□□□□ -0.17
PTPRU-204ENST00000428026 LDB2O43679 373 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 ARL6IP5O75915 188 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 ACVRL1P37023 503 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 SLC11A1P49279 550 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 UBXN2BQ14CS0 331 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 CHRNA6Q15825 494 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 SPRED3Q2MJR0 410 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 DNAJB7Q7Z6W7 309 aaPredicted RBP14.02□□□□□ -0.17
PTPRU-204ENST00000428026 CMTR2Q8IYT2 770 aaKnown RBP14.02□□□□□ -0.17
PTPRU-204ENST00000428026 FAM46DQ8NEK8 389 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 NSUN3Q9H649 340 aaKnown RBP14.02□□□□□ -0.17
PTPRU-204ENST00000428026 SMURF1Q9HCE7 757 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 RP2O75695 350 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 CHRNA1P02708 482 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 GMPRP36959 345 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 BDKRB1P46663 353 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 RGS19P49795 217 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 NUDT13Q86X67 352 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 CCSER2Q9H7U1 834 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 NEUROD4Q9HD90 331 aa14.02□□□□□ -0.17
PTPRU-204ENST00000428026 RASAL1O95294 804 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 RAB36O95755 333 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 SRPRAP08240 638 aaKnown RBP14.01□□□□□ -0.17
PTPRU-204ENST00000428026 RPL19P84098 196 aaKnown RBP14.01□□□□□ -0.17
PTPRU-204ENST00000428026 SMYD5Q6GMV2 418 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 NUP54Q7Z3B4 507 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 RBM12BQ8IXT5 1001 aaKnown RBP14.01□□□□□ -0.17
PTPRU-204ENST00000428026 RASGEF1AQ8N9B8 481 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 OR8K3Q8NH51 312 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 NTAN1Q96AB6 310 aa14.01□□□□□ -0.17
PTPRU-204ENST00000428026 HAPLN3Q96S86 360 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms