RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 HEXBP07686 556 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 CELA2AP08217 269 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 COX6A1P12074 109 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 ACPPP15309 386 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 ITGA3P26006 1051 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 AHRP35869 848 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 MSH2P43246 934 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 MAGEA12P43365 314 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 CD97P48960 835 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 TLE1Q04724 770 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 RGS1Q08116 209 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 KLRB1Q12918 225 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 PWP1Q13610 501 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 DOC2AQ14183 400 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 MINDY4Q4G0A6 757 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 XKR6Q5GH73 641 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 TECRLQ5HYJ1 363 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 CDKL4Q5MAI5 379 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 ATG9BQ674R7 924 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 ATG14Q6ZNE5 492 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 LANCL3Q6ZV70 420 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 VN1R5Q7Z5H4 357 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 AFAP1L2Q8N4X5 818 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 TBC1D19Q8N5T2 526 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 TEX19Q8NA77 164 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 MYRIPQ8NFW9 859 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 UTP15Q8TED0 518 aaKnown RBP12.88□□□□□ -0.35
SNX3-204ENST00000426155 CCT6BQ92526 530 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 PEX11GQ96HA9 241 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 TXLNGYQ9BZA5 131 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 CD244Q9BZW8 370 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 TGIF2Q9GZN2 237 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 SLC6A16Q9GZN6 736 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 VN1R1Q9GZP7 353 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 EPB41L4BQ9H329 900 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 ZNF552Q9H707 407 aaPredicted RBP12.88□□□□□ -0.35
SNX3-204ENST00000426155 GPRC5BQ9NZH0 403 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 SLC22A7Q9Y694 548 aa12.88□□□□□ -0.35
SNX3-204ENST00000426155 IGHV3-20A0A0C4DH32 117 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 J3QKU1 62 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 CLGNO14967 610 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 GALR3O60755 368 aaPredicted RBP12.87□□□□□ -0.35
SNX3-204ENST00000426155 TBX6O95947 436 aaPredicted RBP12.87□□□□□ -0.35
SNX3-204ENST00000426155 IGHEP01854 428 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 ALOX12P18054 663 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 HNRNPH1P31943 449 aaKnown RBP12.87□□□□□ -0.35
SNX3-204ENST00000426155 CASRP41180 1078 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 AIMP2Q13155 320 aaKnown RBP12.87□□□□□ -0.35
SNX3-204ENST00000426155 MYBPC3Q14896 1274 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 FAM83EQ2M2I3 478 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 TMIGD1Q6UXZ0 262 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 LRRC70Q7Z2Q7 622 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 RHEBL1Q8TAI7 183 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 UBTD2Q8WUN7 234 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 ISL2Q96A47 359 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 ATP13A2Q9NQ11 1180 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 CPSF2Q9P2I0 782 aaKnown RBP12.87□□□□□ -0.35
SNX3-204ENST00000426155 ANAPC2Q9UJX6 822 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 ZNF490Q9ULM2 529 aaPredicted RBP12.87□□□□□ -0.35
SNX3-204ENST00000426155 IKBKGQ9Y6K9 419 aa12.87□□□□□ -0.35
SNX3-204ENST00000426155 UBR5O95071 2799 aaPredicted RBP12.86□□□□□ -0.35
SNX3-204ENST00000426155 RELNP78509 3460 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 IGHV1-45A0A0A0MS14 117 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 SIX3O95343 332 aaPredicted RBP12.86□□□□□ -0.35
SNX3-204ENST00000426155 HPP00738 406 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 ABHD2P08910 425 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 GFAPP14136 432 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 SERPINB9P50453 376 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 MLLT10P55197 1068 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 CHIT1Q13231 466 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 HERC3Q15034 1050 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 SETDB1Q15047 1291 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 ACAP2Q15057 778 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 PCOLCEQ15113 449 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 PFKFB4Q16877 469 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 PRR30Q53SZ7 412 aaPredicted RBP12.86□□□□□ -0.35
SNX3-204ENST00000426155 VWA5B1Q5TIE3 1220 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 TRMT10CQ7L0Y3 403 aaKnown RBP12.86□□□□□ -0.35
SNX3-204ENST00000426155 TAOK1Q7L7X3 1001 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 KRT78Q8N1N4 520 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 RNF175Q8N4F7 328 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 RBMXL3Q8N7X1 1067 aaKnown RBP12.86□□□□□ -0.35
SNX3-204ENST00000426155 TRPV3Q8NET8 790 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 TSLPQ969D9 159 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 NACC2Q96BF6 587 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 PTCD3Q96EY7 689 aaKnown RBP12.86□□□□□ -0.35
SNX3-204ENST00000426155 THOC3Q96J01 351 aaKnown RBP12.86□□□□□ -0.35
SNX3-204ENST00000426155 SMAD5Q99717 465 aaKnown RBP12.86□□□□□ -0.35
SNX3-204ENST00000426155 XPR1Q9UBH6 696 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 OPTCQ9UBM4 332 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 ZNF180Q9UJW8 692 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 ZNF451Q9Y4E5 1061 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 CSAG2Q9Y5P2 127 aa12.86□□□□□ -0.35
SNX3-204ENST00000426155 NBASA2RRP1 2371 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 NSG1A0A0A6YYJ2 146 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 SYCE1LA8MT33 242 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 K7EPI3 171 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 CHST10O43529 356 aa12.85□□□□□ -0.35
SNX3-204ENST00000426155 H2AFYO75367 372 aaKnown RBP12.85□□□□□ -0.35
SNX3-204ENST00000426155 SH3BGRLO75368 114 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms