RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 HNF4AP41235 474 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 KCNC1P48547 511 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 STXBP1P61764 594 aaKnown RBP10.36□□□□□ -0.75
USP49-204ENST00000423567 RAPSNQ13702 412 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 MYBPC3Q14896 1274 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 SYT16Q17RD7 645 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 MINDY4Q4G0A6 757 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 DEFB134Q4QY38 66 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 VWA5B1Q5TIE3 1220 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 KIRREL2Q6UWL6 708 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 ZC3H7AQ8IWR0 971 aaKnown RBP10.36□□□□□ -0.75
USP49-204ENST00000423567 EIF1ADQ8N9N8 165 aaKnown RBP10.36□□□□□ -0.75
USP49-204ENST00000423567 ANKRD53Q8N9V6 530 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 FDCSPQ8NFU4 85 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 UBTD2Q8WUN7 234 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 DCAKDQ8WVC6 231 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 TM9SF4Q92544 642 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 UBE2E3Q969T4 207 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 ISL2Q96A47 359 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 MTBPQ96DY7 904 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 MOCOSQ96EN8 888 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 FAR2Q96K12 515 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 SCYL1Q96KG9 808 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 NT5DC2Q9H857 520 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 CLK4Q9HAZ1 481 aaKnown RBP10.36□□□□□ -0.75
USP49-204ENST00000423567 C19orf25Q9UFG5 118 aaPredicted RBP10.36□□□□□ -0.75
USP49-204ENST00000423567 MKL2Q9ULH7 1088 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 TMCO1Q9UM00 188 aa10.36□□□□□ -0.75
USP49-204ENST00000423567 TNPO3Q9Y5L0 923 aaKnown RBP10.36□□□□□ -0.75
USP49-204ENST00000423567 ATMQ13315 3056 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 NSG1A0A0A6YYJ2 146 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 IQANK1A0A1B0GTG1 560 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 ZNF860A6NHJ4 632 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 K7EPI3 171 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 PSMD12O00232 456 aaPredicted RBP10.35□□□□□ -0.75
USP49-204ENST00000423567 SUV39H1O43463 412 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 GALR3O60755 368 aaPredicted RBP10.35□□□□□ -0.75
USP49-204ENST00000423567 SMIM24O75264 130 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 ALOX12BO75342 701 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 CLEC3AO75596 197 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 BMP10O95393 424 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 HPP00738 406 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 UQCRHP07919 91 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 C8orf89P0DMQ9 161 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 COL6A2P12110 1019 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 PLA2G2AP14555 144 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 JAK1P23458 1154 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 MAGEA12P43365 314 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 PIK3CGP48736 1102 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 CSRP3P50461 194 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 ALDH18A1P54886 795 aaKnown RBP10.35□□□□□ -0.75
USP49-204ENST00000423567 AP2B1P63010 937 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 EEF1A2Q05639 463 aaKnown RBP10.35□□□□□ -0.75
USP49-204ENST00000423567 TGM3Q08188 693 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 CHIT1Q13231 466 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 DOC2AQ14183 400 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 TBCCQ15814 346 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 PFKFB4Q16877 469 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 TOR1AIP1Q5JTV8 583 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 FAAH2Q6GMR7 532 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 NDUFAF7Q7L592 441 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 PRSS41Q7RTY9 318 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 PDSS2Q86YH6 399 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 TMEM151BQ8IW70 566 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.35□□□□□ -0.756e-7■■■■■ 139.2
USP49-204ENST00000423567 AFAP1L2Q8N4X5 818 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 LRRN4CLQ8ND94 238 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 OR11G2Q8NGC1 345 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.35□□□□□ -0.75
USP49-204ENST00000423567 OR1F2PQ96R84 312 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 NUDT9Q9BW91 350 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 SLC6A16Q9GZN6 736 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 MLXIPLQ9NP71 852 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 RIC8BQ9NVN3 520 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 C5AR2Q9P296 337 aa10.35□□□□□ -0.75
USP49-204ENST00000423567 CPSF2Q9P2I0 782 aaKnown RBP10.35□□□□□ -0.75
USP49-204ENST00000423567 HEATR5BQ9P2D3 2071 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 COL6A6A6NMZ7 2263 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 J3QKU1 62 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 K7EM74 188 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 PDGFAP04085 211 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 FAM153BP0C7A2 387 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 CASRP41180 1078 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 AGTR2P50052 363 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 SOX8P57073 446 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 RAB8AP61006 207 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 SLC29A2Q14542 456 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 SETDB1Q15047 1291 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 FAM153CQ494X1 144 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 AGAP7PQ5VUJ5 663 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 METTL2BQ6P1Q9 378 aaKnown RBP10.34□□□□□ -0.75
USP49-204ENST00000423567 MED27Q6P2C8 311 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 TRIM40Q6P9F5 258 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 MYLK4Q86YV6 388 aaPredicted RBP10.34□□□□□ -0.75
USP49-204ENST00000423567 PARP9Q8IXQ6 854 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 KBTBD2Q8IY47 623 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 GSPT2Q8IYD1 628 aaKnown RBP10.34□□□□□ -0.75
USP49-204ENST00000423567 TEX9Q8N6V9 391 aa10.34□□□□□ -0.75
USP49-204ENST00000423567 UTP15Q8TED0 518 aaKnown RBP10.34□□□□□ -0.75
USP49-204ENST00000423567 CREB3L4Q8TEY5 395 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms