RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 HYKKA2RU49 373 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 TXNDC9O14530 226 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 ERI3O43414 337 aaKnown RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 ATP6AP2O75787 350 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 ATXN8OSP0DMR3 200 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 ZNF28P17035 718 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 LSP1P33241 339 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 STXBP1P61764 594 aaKnown RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 GNGT1P63211 74 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 IMPG1Q17R60 797 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 ADPRMQ3LIE5 342 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 DCAF12Q5T6F0 453 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 VWA5B1Q5TIE3 1220 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 TLDC1Q6P9B6 456 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 CEACAM20Q6UY09 585 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 PRSS41Q7RTY9 318 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 MAVSQ7Z434 540 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 WDR75Q8IWA0 830 aaKnown RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 LRRC34Q8IZ02 419 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 METTL27Q8N6F8 245 aaPredicted RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 OR2T11Q8NH01 316 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 MS4A6EQ96DS6 147 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 THOC1Q96FV9 657 aaKnown RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 C3orf30Q96M34 536 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 TAAR9Q96RI9 348 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 C17orf62Q9BQA9 187 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 MRPL1Q9BYD6 325 aaKnown RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 BRF2Q9HAW0 419 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 DHCR7Q9UBM7 475 aaKnown RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 SEC16AO15027 2179 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 C9orf172C9J069 976 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 RTCAO00442 366 aaKnown RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 PLPP1O14494 284 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 HDAC3O15379 428 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 TNFSF15O95150 251 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 NTRK1P04629 796 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 IL1RNP18510 177 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 PTX3P26022 381 aaPredicted RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 GCGRP47871 477 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 PLA2G16P53816 162 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.94□□□□□ -0.02
DDX55-203ENST00000421670 XKR7Q5GH72 579 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 DEPDC1Q5TB30 811 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 TTLL10Q6ZVT0 673 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 CHSY3Q70JA7 882 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 TRIM46Q7Z4K8 759 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 KIRREL3Q8IZU9 778 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 GBP7Q8N8V2 638 aaPredicted RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 SLC38A9Q8NBW4 561 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 UTP15Q8TED0 518 aaKnown RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 GAL3ST3Q96A11 431 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 FAR2Q96K12 515 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 ZNF317Q96PQ6 595 aaPredicted RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 NDC1Q9BTX1 674 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 SORBS1Q9BX66 1292 aaKnown RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 ULBP3Q9BZM4 244 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 SLC7A5P2Q9GIP4 190 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 ACTR5Q9H9F9 607 aaPredicted RBP14.94□□□□□ -0.02
DDX55-203ENST00000421670 POLR1BQ9H9Y6 1135 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 ENAMQ9NRM1 1142 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 CUTCQ9NTM9 273 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 FOXJ2Q9P0K8 574 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 GIMAP2Q9UG22 337 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 PPT2Q9UMR5 302 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 CCL27Q9Y4X3 112 aa14.94□□□□□ -0.02
DDX55-203ENST00000421670 CCDC88CQ9P219 2028 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 NUP210LQ5VU65 1888 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 KIAA0754O94854 1291 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 HSD3B1P14060 373 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 HSD3B2P26439 372 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 RAP1GDS1P52306 607 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 SEC24CP53992 1094 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 ZNF33BQ06732 778 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 CAMK2BQ13554 666 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 NR6A1Q15406 480 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 DEFB134Q4QY38 66 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 SPDYAQ5MJ70 313 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 MANEAQ5SRI9 462 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 C1orf189Q5VU69 101 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 CGB2Q6NT52 195 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 TRIM40Q6P9F5 258 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 RNF165Q6ZSG1 346 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 ABHD13Q7L211 337 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 UBE3DQ7Z6J8 389 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 BPHLQ86WA6 291 aaPredicted RBP14.93□□□□□ -0.02
DDX55-203ENST00000421670 PDSS2Q86YH6 399 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 OR2L5Q8NG80 312 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 SERPINI1Q99574 410 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 DDA1Q9BW61 102 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 SCNM1Q9BWG6 230 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 NPHS2Q9NP85 383 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 LHX9Q9NQ69 397 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 VPS29Q9UBQ0 182 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 NDOR1Q9UHB4 597 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 PCDHB3Q9Y5E6 796 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 PCDHGA8Q9Y5G5 932 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 USH1CQ9Y6N9 552 aa14.93□□□□□ -0.02
DDX55-203ENST00000421670 SERTM1A2A2V5 107 aa14.92□□□□□ -0.02
DDX55-203ENST00000421670 URADA6NGE7 173 aa14.92□□□□□ -0.02
DDX55-203ENST00000421670 ZNF860A6NHJ4 632 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms