RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 SLITRK4Q8IW52 837 aa20.53■□□□□ 0.88
ABCF3-202ENST00000421340 FITM2Q8N6M3 262 aa20.53■□□□□ 0.88
ABCF3-202ENST00000421340 C1orf52Q8N6N3 182 aaKnown RBP20.53■□□□□ 0.88
ABCF3-202ENST00000421340 CATSPER2Q96P56 530 aa20.53■□□□□ 0.88
ABCF3-202ENST00000421340 TBCDQ9BTW9 1192 aa20.53■□□□□ 0.88
ABCF3-202ENST00000421340 ROGDIQ9GZN7 287 aa20.53■□□□□ 0.88
ABCF3-202ENST00000421340 WBP11Q9Y2W2 641 aaKnown RBP20.53■□□□□ 0.88
ABCF3-202ENST00000421340 COPG1Q9Y678 874 aaKnown RBP20.53■□□□□ 0.88
ABCF3-202ENST00000421340 OTOGLQ3ZCN5 2332 aa20.53■□□□□ 0.88
ABCF3-202ENST00000421340 RALGAPA1Q6GYQ0 2036 aa20.53■□□□□ 0.88
ABCF3-202ENST00000421340 CCT8L1PA6NM43 557 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 EBAG9O00559 213 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 PLPP1O14494 284 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 SMIM10L1P0DMW3 83 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 BCKDHAP12694 445 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 BSGP35613 385 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 GSTM5P46439 218 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 RAP1GDS1P52306 607 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 DIO3P55073 304 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 STX1BP61266 288 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 PRTGQ2VWP7 1150 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 PDCD4Q53EL6 469 aaKnown RBP20.52■□□□□ 0.88
ABCF3-202ENST00000421340 SNAP47Q5SQN1 464 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 WASHC2DQ5SRD0 308 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 OR4C11Q6IEV9 310 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 ABHD17CQ6PCB6 329 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 ASCL5Q7RTU5 278 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 COMMD6Q7Z4G1 85 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 UBE3DQ7Z6J8 389 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 CSNK1A1LQ8N752 337 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 GAL3ST3Q96A11 431 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 SMIM10Q96HG1 83 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 KCNC2Q96PR1 638 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 CCDC106Q9BWC9 280 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 AICDAQ9GZX7 198 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 KLHL31Q9H511 634 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 DDX31Q9H8H2 851 aaKnown RBP20.52■□□□□ 0.88
ABCF3-202ENST00000421340 MCM8Q9UJA3 840 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 SLC22A7Q9Y694 548 aa20.52■□□□□ 0.88
ABCF3-202ENST00000421340 WDFY4Q6ZS81 3184 aa20.52■□□□□ 0.87
ABCF3-202ENST00000421340 FITM1A5D6W6 292 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 CASC3O15234 703 aaKnown RBP20.51■□□□□ 0.87
ABCF3-202ENST00000421340 RFPL3O75679 317 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 TIA1P31483 386 aaKnown RBP eCLIP20.51■□□□□ 0.87
ABCF3-202ENST00000421340 SEPHS1P49903 392 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 VSX2P58304 361 aaPredicted RBP20.51■□□□□ 0.87
ABCF3-202ENST00000421340 RAE1P78406 368 aaKnown RBP20.51■□□□□ 0.87
ABCF3-202ENST00000421340 RPS6KA2Q15349 733 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 TOR1AIP1Q5JTV8 583 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 GARNL3Q5VVW2 1013 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 TMEM214Q6NUQ4 689 aaKnown RBP20.51■□□□□ 0.87
ABCF3-202ENST00000421340 TRIM40Q6P9F5 258 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 MIER2Q8N344 545 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 UTP15Q8TED0 518 aaKnown RBP20.51■□□□□ 0.87
ABCF3-202ENST00000421340 CCDC74BQ96LY2 380 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 TMEM74Q96NL1 305 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 C1orf50Q9BV19 199 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 ZNF717Q9BY31 904 aaPredicted RBP20.51■□□□□ 0.87
ABCF3-202ENST00000421340 PRDM7Q9NQW5 492 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 ZIM2Q9NZV7 527 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 MAPRE3Q9UPY8 281 aa20.51■□□□□ 0.87
ABCF3-202ENST00000421340 A8MU76 341 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 TMX2-CTNND1H3BSU7 103 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 P2RX6O15547 441 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 HCRTR1O43613 425 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 SH3BGRLO75368 114 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 SCELO95171 688 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 G6PDP11413 515 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 GPX3P22352 226 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 TRA2BP62995 288 aaKnown RBP20.5■□□□□ 0.87
ABCF3-202ENST00000421340 ACY1Q03154 408 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 KRT72Q14CN4 511 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 TRIP6Q15654 476 aaKnown RBP20.5■□□□□ 0.87
ABCF3-202ENST00000421340 NIPAL1Q6NVV3 410 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 CYP20A1Q6UW02 462 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 ABHD13Q7L211 337 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 NUDT13Q86X67 352 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 ZCCHC7Q8N3Z6 543 aaKnown RBP20.5■□□□□ 0.87
ABCF3-202ENST00000421340 KCT2Q8NC54 265 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 ERP27Q96DN0 273 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 LHX9Q9NQ69 397 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 DLGAP4Q9Y2H0 992 aa20.5■□□□□ 0.87
ABCF3-202ENST00000421340 DMDP11532 3685 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 A0A088AWK7 358 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 CAPN14A8MX76 684 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 PSMD12O00232 456 aaPredicted RBP20.49■□□□□ 0.87
ABCF3-202ENST00000421340 SAP18O00422 153 aaKnown RBP20.49■□□□□ 0.87
ABCF3-202ENST00000421340 ANKRD28O15084 1053 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 ERI3O43414 337 aaKnown RBP20.49■□□□□ 0.87
ABCF3-202ENST00000421340 PCDH7O60245 1069 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 PRMT3O60678 531 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 EIF2S1P05198 315 aaKnown RBP20.49■□□□□ 0.87
ABCF3-202ENST00000421340 ANXA4P09525 319 aaPredicted RBP20.49■□□□□ 0.87
ABCF3-202ENST00000421340 ZNF10P21506 573 aaPredicted RBP20.49■□□□□ 0.87
ABCF3-202ENST00000421340 CCKBRP32239 447 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 ASMTP46597 345 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 CLDN8P56748 225 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 C21orf58P58505 322 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 KLF10Q13118 480 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 UBAP2LQ14157 1087 aaKnown RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms