RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 RNF112Q9ULX5 631 aa15.54■□□□□ 0.08
LINC00404-201ENST00000418660 OR2W5A6NFC9 320 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 TCP11X1B4DZS4 312 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 CHST10O43529 356 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 STK16O75716 305 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 SEC24DO94855 1032 aaPredicted RBP15.53■□□□□ 0.08
LINC00404-201ENST00000418660 B3GALT4O96024 378 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 SMIM10L1P0DMW3 83 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 GSTM2P28161 218 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 UQCRFS1P47985 274 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 HSPA7P48741 367 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 RAB8AP61006 207 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 RHAGQ02094 409 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 SRSF1Q07955 248 aaKnown RBP eCLIP15.53■□□□□ 0.08
LINC00404-201ENST00000418660 SLBPQ14493 270 aaKnown RBP eCLIP15.53■□□□□ 0.08
LINC00404-201ENST00000418660 SLMAPQ14BN4 828 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 EFTUD2Q15029 972 aaKnown RBP eCLIP15.53■□□□□ 0.08
LINC00404-201ENST00000418660 TLR1Q15399 786 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 TMIGD1Q6UXZ0 262 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 ANKRD37Q7Z713 158 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 TBC1D1Q86TI0 1168 aaPredicted RBP15.53■□□□□ 0.08
LINC00404-201ENST00000418660 FAM26EQ8N5C1 309 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 TTLQ8NG68 377 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 STAG3L4Q8TBR4 150 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 TBC1D20Q96BZ9 403 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 SMIM10Q96HG1 83 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 PITHD1Q9GZP4 211 aaPredicted RBP15.53■□□□□ 0.08
LINC00404-201ENST00000418660 EHD1Q9H4M9 534 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 KLHL31Q9H511 634 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 NT5DC2Q9H857 520 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 ASF1BQ9NVP2 202 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 PTGFRNQ9P2B2 879 aa15.53■□□□□ 0.08
LINC00404-201ENST00000418660 MTRF1LQ9UGC7 380 aaKnown RBP15.53■□□□□ 0.08
LINC00404-201ENST00000418660 PTBP2Q9UKA9 531 aaKnown RBP15.53■□□□□ 0.08
LINC00404-201ENST00000418660 COPG1Q9Y678 874 aaKnown RBP15.53■□□□□ 0.08
LINC00404-201ENST00000418660 IGHV3-20A0A0C4DH32 117 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 MAGEB17A8MXT2 336 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 CLGNO14967 610 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 DNAJB6O75190 326 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 S100BP04271 92 aaPredicted RBP15.52■□□□□ 0.08
LINC00404-201ENST00000418660 FHP07954 510 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 CELA2AP08217 269 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 ITGAMP11215 1152 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 TFEBP19484 476 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 JAK1P23458 1154 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 PHBP35232 272 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 GMPRP36959 345 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 HNF4AP41235 474 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 TSFMP43897 325 aaKnown RBP15.52■□□□□ 0.08
LINC00404-201ENST00000418660 KCNC1P48547 511 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 OLR1P78380 273 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 DLG1Q12959 904 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 ZNF169Q14929 603 aaPredicted RBP15.52■□□□□ 0.08
LINC00404-201ENST00000418660 NSDHLQ15738 373 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 FBXO48Q5FWF7 155 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 TOR1AIP1Q5JTV8 583 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 B3GNTL1Q67FW5 361 aaPredicted RBP15.52■□□□□ 0.08
LINC00404-201ENST00000418660 PLAG1Q6DJT9 500 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 CCDC91Q7Z6B0 441 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 ISCA2Q86U28 154 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 RELL1Q8IUW5 271 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.52■□□□□ 0.08
LINC00404-201ENST00000418660 KRT78Q8N1N4 520 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 SIRT6Q8N6T7 355 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 NOA1Q8NC60 698 aaKnown RBP15.52■□□□□ 0.08
LINC00404-201ENST00000418660 ESAMQ96AP7 390 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 SEC16BQ96JE7 1060 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 CNDP1Q96KN2 507 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 BARD1Q99728 777 aaKnown RBP15.52■□□□□ 0.08
LINC00404-201ENST00000418660 RBCK1Q9BYM8 510 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 TSPYL1Q9H0U9 437 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 ALG9Q9H6U8 611 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 NINJ2Q9NZG7 142 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 DMGDHQ9UI17 866 aaKnown RBP15.52■□□□□ 0.08
LINC00404-201ENST00000418660 ACOT9Q9Y305 439 aa15.52■□□□□ 0.08
LINC00404-201ENST00000418660 DOCK10Q96BY6 2186 aa15.52■□□□□ 0.07
LINC00404-201ENST00000418660 ASH1LQ9NR48 2969 aaKnown RBP15.51■□□□□ 0.07
LINC00404-201ENST00000418660 KIF2AO00139 706 aaPredicted RBP15.51■□□□□ 0.07
LINC00404-201ENST00000418660 CDC123O75794 336 aaPredicted RBP15.51■□□□□ 0.07
LINC00404-201ENST00000418660 UQCRHP07919 91 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 LTA4HP09960 611 aaKnown RBP15.51■□□□□ 0.07
LINC00404-201ENST00000418660 CTAGE8P0CG41 777 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 STXBP1P61764 594 aaKnown RBP15.51■□□□□ 0.07
LINC00404-201ENST00000418660 ARG2P78540 354 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 ABRAXAS2Q15018 415 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 PDK4Q16654 411 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 BTBD16Q32M84 506 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 GLE1Q53GS7 698 aaKnown RBP15.51■□□□□ 0.07
LINC00404-201ENST00000418660 CTAGE4Q8IX94 777 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 SNX31Q8N9S9 440 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 CATSPER1Q8NEC5 780 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 HAS2Q92819 552 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 MRRFQ96E11 262 aaKnown RBP15.51■□□□□ 0.07
LINC00404-201ENST00000418660 WDR34Q96EX3 536 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 CD244Q9BZW8 370 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 AICDAQ9GZX7 198 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 IGSF5Q9NSI5 407 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 NUDT4Q9NZJ9 180 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 NTNG1Q9Y2I2 539 aa15.51■□□□□ 0.07
LINC00404-201ENST00000418660 NBASA2RRP1 2371 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms