RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 CD96P40200 585 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 ITGA8P53708 1063 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 CASP6P55212 293 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 DR1Q01658 176 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 USP10Q14694 798 aaKnown RBP13.29□□□□□ -0.28
LINC01006-202ENST00000418309 RBBP5Q15291 538 aaKnown RBP13.29□□□□□ -0.28
LINC01006-202ENST00000418309 OR1C1Q15619 314 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 SPINK14Q6IE38 97 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 NIPAL1Q6NVV3 410 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 THOC6Q86W42 341 aaKnown RBP13.29□□□□□ -0.28
LINC01006-202ENST00000418309 AFAP1L2Q8N4X5 818 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 NT5CQ8TCD5 201 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 MARVELD3Q96A59 401 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 LRRC39Q96DD0 335 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 PDLIM5Q96HC4 596 aaKnown RBP13.29□□□□□ -0.28
LINC01006-202ENST00000418309 RUNDC3BQ96NL0 473 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 PTCHD1Q96NR3 888 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 SIGLEC12Q96PQ1 595 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 EGFL8Q99944 293 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 AIF1LQ9BQI0 150 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 TRIM51Q9BSJ1 452 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 TRIM31Q9BZY9 425 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 SPNS1Q9H2V7 528 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 RHBGQ9H310 441 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 CDCP1Q9H5V8 836 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 PLAC1Q9HBJ0 212 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 ZFP69BQ9UJL9 534 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 IKZF3Q9UKT9 509 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 SLC22A14Q9Y267 594 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 BOLA1Q9Y3E2 137 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 TEX264Q9Y6I9 313 aa13.29□□□□□ -0.28
LINC01006-202ENST00000418309 CREBBPQ92793 2442 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 GABRR3A8MPY1 467 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 PSMD12O00232 456 aaPredicted RBP13.28□□□□□ -0.28
LINC01006-202ENST00000418309 CDC7O00311 574 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 NDC80O14777 642 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 HNRNPRO43390 633 aaKnown RBP13.28□□□□□ -0.28
LINC01006-202ENST00000418309 MAN1A2O60476 641 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 PRMT3O60678 531 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 EEF1DP29692 281 aaKnown RBP13.28□□□□□ -0.28
LINC01006-202ENST00000418309 AHRP35869 848 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 SCTRP47872 440 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 SLC26A5P58743 744 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 RAB8AP61006 207 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 MGAT5Q09328 741 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 NAA30Q147X3 362 aaPredicted RBP13.28□□□□□ -0.28
LINC01006-202ENST00000418309 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.28□□□□□ -0.28
LINC01006-202ENST00000418309 STEAP4Q687X5 459 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 SBSNQ6UWP8 590 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 STRA8Q7Z7C7 330 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 TMPRSS11BQ86T26 416 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 SRRM1Q8IYB3 904 aaKnown RBP13.28□□□□□ -0.28
LINC01006-202ENST00000418309 NKAPQ8N5F7 415 aaKnown RBP13.28□□□□□ -0.28
LINC01006-202ENST00000418309 HORMAD2Q8N7B1 307 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 TRPV3Q8NET8 790 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 UTP15Q8TED0 518 aaKnown RBP13.28□□□□□ -0.28
LINC01006-202ENST00000418309 HES7Q9BYE0 225 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 PELI2Q9HAT8 420 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 ENTPD4Q9Y227 616 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 KCNE2Q9Y6J6 123 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 CENPEQ02224 2701 aa13.28□□□□□ -0.28
LINC01006-202ENST00000418309 FAM95CA0A1B0GW59 222 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 NPEPPSL1A6NEC2 478 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 ENO4A6NNW6 628 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 H2AFYO75367 372 aaKnown RBP13.27□□□□□ -0.29
LINC01006-202ENST00000418309 MLYCDO95822 493 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 ZNF37AP17032 561 aaPredicted RBP13.27□□□□□ -0.29
LINC01006-202ENST00000418309 CA7P43166 264 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 GNG11P61952 73 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 BTG2P78543 158 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 REEP5Q00765 189 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 ALDH6A1Q02252 535 aaKnown RBP13.27□□□□□ -0.29
LINC01006-202ENST00000418309 PDIA2Q13087 525 aaKnown RBP13.27□□□□□ -0.29
LINC01006-202ENST00000418309 ZNF460Q14592 562 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 MAPKAPK3Q16644 382 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 MTFR2Q6P444 385 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 NXPE4Q6UWF7 544 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 FRA10AC1Q70Z53 315 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 ZC3HC1Q86WB0 502 aaKnown RBP13.27□□□□□ -0.29
LINC01006-202ENST00000418309 RPS19BP1Q86WX3 136 aaKnown RBP13.27□□□□□ -0.29
LINC01006-202ENST00000418309 ANKRD53Q8N9V6 530 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 TMEM178AQ8NBL3 297 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 FAM98AQ8NCA5 519 aaKnown RBP13.27□□□□□ -0.29
LINC01006-202ENST00000418309 MDS2Q8NDY4 140 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 FBXO36Q8NEA4 188 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 CCDC120Q96HB5 630 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 NPAS2Q99743 824 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 WDR83Q9BRX9 315 aaKnown RBP13.27□□□□□ -0.29
LINC01006-202ENST00000418309 TSPAN10Q9H1Z9 355 aaPredicted RBP13.27□□□□□ -0.29
LINC01006-202ENST00000418309 KLHL31Q9H511 634 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 PCDHGB6Q9Y5F9 930 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 PSAT1Q9Y617 370 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 CRYBG3Q68DQ2 2970 aa13.27□□□□□ -0.29
LINC01006-202ENST00000418309 ITPR2Q14571 2701 aa13.26□□□□□ -0.29
LINC01006-202ENST00000418309 A8MUA0 341 aa13.26□□□□□ -0.29
LINC01006-202ENST00000418309 SLC19A2O60779 497 aa13.26□□□□□ -0.29
LINC01006-202ENST00000418309 WISP2O76076 250 aa13.26□□□□□ -0.29
LINC01006-202ENST00000418309 ESRRAP11474 423 aaPredicted RBP13.26□□□□□ -0.29
LINC01006-202ENST00000418309 RNH1P13489 461 aaKnown RBP13.26□□□□□ -0.29
LINC01006-202ENST00000418309 MAOAP21397 527 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms