RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 CSNK1G3Q9Y6M4 447 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 SMIM28A0A1B0GU29 152 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 J3KR12 359 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 TNFRSF11BO00300 401 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 RFXANKO14593 260 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 FFAR3O14843 346 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 GPR42O15529 346 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 TPST2O60704 377 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 CCNB2O95067 398 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 C1QCP02747 245 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 FGF1P05230 155 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 ODC1P11926 461 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 APEX1P27695 318 aaKnown RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 CLCNKAP51800 687 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 GBX2P52951 348 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 RPS14P62263 151 aaKnown RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 SPHARQ15513 63 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 DLK2Q6UY11 383 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 LINC00518Q8N0U6 118 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 SLC34A3Q8N130 599 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 Q8N402 240 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 ANKRD53Q8N9V6 530 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 TTLQ8NG68 377 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 CD200R1Q8TD46 325 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 MARC2Q969Z3 335 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 NIPSNAP1Q9BPW8 284 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 ANKRA2Q9H9E1 313 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 ZFP64Q9NPA5 681 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 MPP6Q9NZW5 540 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 DIMT1Q9UNQ2 313 aaKnown RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 IRAK2O43187 625 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 NIPSNAP2O75323 286 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 GPX2P18283 190 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 HLA-DPA1P20036 260 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 BMP8BP34820 402 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 PIK3CGP48736 1102 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 SOX4Q06945 474 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 WSCD1Q658N2 575 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 BMP8AQ7Z5Y6 402 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 PHC2Q8IXK0 858 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 RGL4Q8IZJ4 473 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 AGBL3Q8NEM8 1001 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 OR7D4Q8NG98 312 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 FBXW5Q969U6 566 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 KLHL15Q96M94 604 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 CD244Q9BZW8 370 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 ABHD16BQ9H3Z7 469 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 RANBP3Q9H6Z4 567 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 PPP1R3EQ9H7J1 279 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 CUEDC1Q9NWM3 386 aaPredicted RBP7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 GPRC5BQ9NZH0 403 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 OGDHLQ9ULD0 1010 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 TMCC3Q9ULS5 477 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 FKBP7Q9Y680 259 aa7.73□□□□□ -1.17
HMGXB4-202ENST00000418170 DOCK4Q8N1I0 1966 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 A0A1B0GVM2 712 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 INMT-MINDY4F8WBC2 141 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CLIC1O00299 241 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 QSOX1O00391 747 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 ADAMDEC1O15204 470 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CHP2O43745 196 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 ULK1O75385 1050 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CSO75390 466 aaKnown RBP7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 IFNA7P01567 189 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 PIRTP0C851 137 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 PKMP14618 531 aaKnown RBP7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CD9P21926 228 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 AKAP5P24588 427 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CACNB2Q08289 660 aaPredicted RBP7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 MSANTD2Q6P1R3 559 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 TSEN54Q7Z6J9 526 aaKnown RBP7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 ABI3BPQ7Z7G0 1075 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 TMEM145Q8NBT3 493 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 COPS5Q92905 334 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 EMID1Q96A84 441 aaPredicted RBP7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CREB3L1Q96BA8 519 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 PCED1BQ96HM7 432 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 KCNJ15Q99712 375 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 SOSTQ9BQB4 213 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 KATNAL1Q9BW62 490 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 FOLH1BQ9HBA9 442 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 IL20Q9NYY1 176 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 PTTG3PQ9NZH4 202 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 FNIP2Q9P278 1114 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CDH10Q9Y6N8 788 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 A0A1W2PRG6 482 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 E9PAM4 449 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 PI15O43692 258 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 FZD6O60353 706 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 MPZL2O60487 215 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 KCNJ13O60928 360 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 LHCGRP22888 699 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CBX5P45973 191 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 MAP2K6P52564 334 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CRYBA2P53672 197 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CDC42P60953 191 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 EXOSC2Q13868 293 aaKnown RBP7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 VEZF1Q14119 521 aa7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 SF3A2Q15428 464 aaKnown RBP7.72□□□□□ -1.17
HMGXB4-202ENST00000418170 CLVS2Q5SYC1 327 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms