RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 PLLPQ9Y342 182 aa21.92■■□□□ 1.1
SMARCB1-205ENST00000417137 KLF7O75840 302 aaPredicted RBP21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 OTCP00480 354 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 PCNAP12004 261 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 CPA3P15088 417 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 IL1RNP18510 177 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 PHEXP78562 749 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 RHDQ02161 417 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 TGM3Q08188 693 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 RBBP7Q16576 425 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 NKG7Q16617 165 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 TOR1AIP1Q5JTV8 583 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 MILR1Q7Z6M3 343 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 AFAP1L2Q8N4X5 818 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 OR7G3Q8NG95 312 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 UTP15Q8TED0 518 aaKnown RBP21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 THAP4Q8WY91 577 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 MIEF2Q96C03 454 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 CENPHQ9H3R5 247 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 CLK4Q9HAZ1 481 aaKnown RBP21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 SEMA4BQ9NPR2 832 aaPredicted RBP21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 ARGLU1Q9NWB6 273 aaPredicted RBP21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 NAALAD2Q9Y3Q0 740 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 TSC22D4Q9Y3Q8 395 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 ITPR1Q14643 2758 aa21.91■■□□□ 1.1
SMARCB1-205ENST00000417137 A0A088AWK7 358 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 CDC14CA4D256 554 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 LRIT2A6NDA9 550 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 G3V2L1 256 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 H0YIV9 168 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 OR7A17O14581 309 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 KLHL18O94889 574 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 MYZAPP0CAP1 466 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 ZNF888P0CJ79 500 aaPredicted RBP21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 ZNF10P21506 573 aaPredicted RBP21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 CLCQ05315 142 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 HYAL2Q12891 473 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 CPSF6Q16630 551 aaKnown RBP eCLIP21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 RAB43Q86YS6 212 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 SRFBP1Q8NEF9 429 aaKnown RBP21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 L3HYPDHQ96EM0 354 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 FAR2Q96K12 515 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 NSUN5Q96P11 429 aaKnown RBP21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 IP6K3Q96PC2 410 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 ZBTB26Q9HCK0 441 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 C14orf105Q9NVL8 296 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 CTSFQ9UBX1 484 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 POLHQ9Y253 713 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 STK38LQ9Y2H1 464 aa21.9■■□□□ 1.1
SMARCB1-205ENST00000417137 SEC16AO15027 2179 aa21.89■■□□□ 1.1
SMARCB1-205ENST00000417137 MDC1Q14676 2089 aaKnown RBP21.89■■□□□ 1.1
SMARCB1-205ENST00000417137 NBEAQ8NFP9 2946 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 IGLV3-12A0A075B6K2 115 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 VSTM2BA6NLU5 285 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 SGK494L7N484 410 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 GALR3O60755 368 aaPredicted RBP21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 MLYCDO95822 493 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 ITGB2P05107 769 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 ZGLP1P0C6A0 271 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 PIK3CBP42338 1070 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 CDH13P55290 713 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 DEFB134Q4QY38 66 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 UNC50Q53HI1 259 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 CHSY3Q70JA7 882 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 AMER3Q8N944 861 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 OR52B6Q8NGF0 335 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 STT3BQ8TCJ2 826 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 ZNF473Q8WTR7 871 aaKnown RBP21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 GAL3ST3Q96A11 431 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 NACC2Q96BF6 587 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 CMTM7Q96FZ5 175 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 PGM2Q96G03 612 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 TMEM237Q96Q45 408 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 TGIF2Q9GZN2 237 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 REXO4Q9GZR2 422 aaKnown RBP21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 STMN4Q9H169 189 aaPredicted RBP21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 KLHL31Q9H511 634 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 RNF11Q9Y3C5 154 aa21.89■■□□□ 1.09
SMARCB1-205ENST00000417137 GOLGA6L10A6NI86 522 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 CNOT3O75175 753 aaKnown RBP21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 SPAG7O75391 227 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 IGHEP01854 428 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 SMIM10L1P0DMW3 83 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 IL10P22301 178 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 DNAJB13P59910 316 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 RAB8AP61006 207 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 ASPHQ12797 758 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 TMEM35AQ53FP2 167 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 C10orf62Q5T681 223 aaPredicted RBP21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 TTC19Q6DKK2 380 aaPredicted RBP21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 TRIM40Q6P9F5 258 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 PRSS41Q7RTY9 318 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 VN1R5Q7Z5H4 357 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 MYRIPQ8NFW9 859 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 TRPC4APQ8TEL6 797 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 MS4A6EQ96DS6 147 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 SMIM10Q96HG1 83 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 CENPKQ9BS16 269 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 CELSR3Q9NYQ7 3312 aa21.88■■□□□ 1.09
SMARCB1-205ENST00000417137 ERI3O43414 337 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms