RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 ERP27Q96DN0 273 aa5.64□□□□□ -1.51
LMBR1-204ENST00000415428 TACO1Q9BSH4 297 aaKnown RBP5.64□□□□□ -1.51
LMBR1-204ENST00000415428 SAP130Q9H0E3 1048 aa5.64□□□□□ -1.51
LMBR1-204ENST00000415428 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.64□□□□□ -1.513e-8■■■■□ 20.7
LMBR1-204ENST00000415428 CLSTN2Q9H4D0 955 aa5.64□□□□□ -1.51
LMBR1-204ENST00000415428 ADAP2Q9NPF8 381 aa5.64□□□□□ -1.51
LMBR1-204ENST00000415428 ABCF3Q9NUQ8 709 aa5.64□□□□□ -1.51
LMBR1-204ENST00000415428 FN1P02751 2386 aaKnown RBP5.63□□□□□ -1.51
LMBR1-204ENST00000415428 H7C1Q1 480 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 AP3B1O00203 1094 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 EMC8O43402 210 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 SNX4O95219 450 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 PGM3O95394 542 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 CELA2AP08217 269 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 TMEM253P0C7T8 217 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 CXCR2P25025 360 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 CTNNA2P26232 953 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 CCKARP32238 428 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 CCR7P32248 378 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 PPP2R2BQ00005 443 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 REEP5Q00765 189 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 WLSQ5T9L3 541 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 ITPRIPL1Q6GPH6 555 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 ZNF595Q8IYB9 648 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 CFAP206Q8IYR0 622 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 RAB42Q8N4Z0 105 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 CSNK1A1LQ8N752 337 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 OR52N2Q8NGI0 321 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 PDLIM5Q96HC4 596 aaKnown RBP5.63□□□□□ -1.51
LMBR1-204ENST00000415428 CNDP1Q96KN2 507 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 SPATA13Q96N96 652 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 OSGEPL1Q9H4B0 414 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 SACM1LQ9NTJ5 587 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 TDRKHQ9Y2W6 561 aaKnown RBP5.63□□□□□ -1.51
LMBR1-204ENST00000415428 CHCHD2Q9Y6H1 151 aaPredicted RBP5.63□□□□□ -1.51
LMBR1-204ENST00000415428 P2RX6O15547 441 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 SPRY1O43609 319 aaPredicted RBP5.63□□□□□ -1.51
LMBR1-204ENST00000415428 NRDCO43847 1150 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 MT-CYBP00156 380 aaPredicted RBP5.63□□□□□ -1.51
LMBR1-204ENST00000415428 TCF4P15884 667 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 PTPN6P29350 595 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 ITGA8P53708 1063 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 KRT31Q15323 416 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 RNF187Q5TA31 235 aaPredicted RBP5.63□□□□□ -1.51
LMBR1-204ENST00000415428 ICE2Q659A1 982 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 GALNTL5Q7Z4T8 443 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 PSD4Q8NDX1 1056 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 OR13J1Q8NGT2 312 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 SPPL2AQ8TCT8 520 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 ASZ1Q8WWH4 475 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 ALKBH8Q96BT7 664 aaKnown RBP5.63□□□□□ -1.51
LMBR1-204ENST00000415428 REPS1Q96D71 796 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 SLITRK2Q9H156 845 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 RNF122Q9H9V4 155 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 KCNK13Q9HB14 408 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 FAM114A2Q9NRY5 505 aa5.63□□□□□ -1.51
LMBR1-204ENST00000415428 LOC105369274A0A096LPK9 316 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 LOC102723532A0A0G2JNH3 316 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 NPIPA5E9PKD4 350 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 BIN1O00499 593 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 ANXA5P08758 320 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 OR56A5P0C7T3 313 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 PNMA6AP0CW24 399 aaPredicted RBP5.62□□□□□ -1.51
LMBR1-204ENST00000415428 MAGP20916 626 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 SSR4P51571 173 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 ZNF33BQ06732 778 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 PCBP2Q15366 365 aaKnown RBP eCLIP5.62□□□□□ -1.514e-7■■■■■ 38.8
LMBR1-204ENST00000415428 ELAVL1Q15717 326 aaKnown RBP5.62□□□□□ -1.51
LMBR1-204ENST00000415428 C11orf63Q6NUN7 778 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 C4orf22Q6V702 233 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 CYHR1Q6ZMK1 362 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 ZNF534Q76KX8 674 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 GALNT12Q8IXK2 581 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 ZZZ3Q8IYH5 903 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 OR4N4Q8N0Y3 316 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 ZNF567Q8N184 647 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 OR9A1PQ8NGU1 263 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 OR56A3Q8NH54 315 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 HBEGFQ99075 208 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 RBCK1Q9BYM8 510 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 RBSNQ9H1K0 784 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 PLSCR4Q9NRQ2 329 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 GLRX2Q9NS18 164 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 VTI1BQ9UEU0 232 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 NPIPA1Q9UND3 350 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 ITPR3Q14573 2671 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 TACSTD2P09758 323 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 EGR1P18146 543 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 OGNP20774 298 aaKnown RBP5.62□□□□□ -1.51
LMBR1-204ENST00000415428 AARS2Q5JTZ9 985 aaKnown RBP5.62□□□□□ -1.51
LMBR1-204ENST00000415428 C1orf189Q5VU69 101 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 OR2A2Q6IF42 318 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 SERPINA9Q86WD7 417 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 TEX29Q8N6K0 151 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 OR51Q1Q8NH59 317 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 LPAR4Q99677 370 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 PELOQ9BRX2 385 aaKnown RBP5.62□□□□□ -1.51
LMBR1-204ENST00000415428 G6PC3Q9BUM1 346 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 REG4Q9BYZ8 158 aa5.62□□□□□ -1.51
LMBR1-204ENST00000415428 RHBGQ9H310 441 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms