RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 DOPEY1Q5JWR5 2465 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 LRRTM2O43300 516 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 PRR35P0CG20 571 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 COX6A1P12074 109 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 IMPA1P29218 277 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 AVPR1BP47901 424 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 IFFO1Q0D2I5 559 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 FASTKQ14296 549 aaKnown RBP15.84■□□□□ 0.13
SF1-207ENST00000413951 OR4D1Q15615 310 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 FAM83EQ2M2I3 478 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 VWA2Q5GFL6 755 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 LCA5Q86VQ0 697 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 PAQR7Q86WK9 346 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 PRSS58Q8IYP2 241 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 RHEBL1Q8TAI7 183 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 METTL21AQ8WXB1 218 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 SLX1AQ9BQ83 275 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 TBK1Q9UHD2 729 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 TAC3Q9UHF0 121 aa15.84■□□□□ 0.13
SF1-207ENST00000413951 RUVBL1Q9Y265 456 aaKnown RBP15.84■□□□□ 0.13
SF1-207ENST00000413951 SNRNP200O75643 2136 aaKnown RBP15.83■□□□□ 0.13
SF1-207ENST00000413951 HIVEP3Q5T1R4 2406 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 NUP210LQ5VU65 1888 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 E7ENX8 843 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 E2F3O00716 465 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 KLHL18O94889 574 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 CRYABP02511 175 aaKnown RBP15.83■□□□□ 0.12
SF1-207ENST00000413951 STSP08842 583 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 TAP2Q03519 686 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 Q0VFX4 171 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 ZXDCQ2QGD7 858 aaPredicted RBP15.83■□□□□ 0.12
SF1-207ENST00000413951 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.83■□□□□ 0.129e-8■■□□□ 11.8
SF1-207ENST00000413951 CDKL4Q5MAI5 379 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 THEMIS2Q5TEJ8 643 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 ZNF787Q6DD87 383 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 ZNF425Q6IV72 752 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 SUSD1Q6UWL2 747 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 LRIG3Q6UXM1 1119 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 ADCK2Q7Z695 626 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 TMEM151BQ8IW70 566 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 PLD6Q8N2A8 252 aaKnown RBP15.83■□□□□ 0.12
SF1-207ENST00000413951 FBXL8Q96CD0 374 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 NXNL1Q96CM4 212 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 MAGEB10Q96LZ2 347 aaPredicted RBP15.83■□□□□ 0.12
SF1-207ENST00000413951 OR2A5Q96R48 311 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 ATOH8Q96SQ7 321 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 TUBB6Q9BUF5 446 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 UNKQ9C0B0 810 aaKnown RBP15.83■□□□□ 0.12
SF1-207ENST00000413951 RNF32Q9H0A6 362 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 PCBD2Q9H0N5 130 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 VPS11Q9H270 941 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 PTGFRNQ9P2B2 879 aa15.83■□□□□ 0.12
SF1-207ENST00000413951 STOX2Q9P2F5 926 aaPredicted RBP15.83■□□□□ 0.12
SF1-207ENST00000413951 C19orf25Q9UFG5 118 aaPredicted RBP15.83■□□□□ 0.12
SF1-207ENST00000413951 CCDC88CQ9P219 2028 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 LOC102723996A0A087X1L8 192 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 IGHV1-45A0A0A0MS14 117 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 SMIM23A6NLE4 172 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 H0YIG0 161 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 KERAO60938 352 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 JRKO75564 520 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 HIST1H2AGP0C0S8 130 aaPredicted RBP15.82■□□□□ 0.12
SF1-207ENST00000413951 TFEBP19484 476 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 HIST1H2ADP20671 130 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 SOX11P35716 441 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 KCNC1P48547 511 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 TNFSF10P50591 281 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 ACAP2Q15057 778 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 TGFBIQ15582 683 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 ZRSR2Q15696 482 aaKnown RBP15.82■□□□□ 0.12
SF1-207ENST00000413951 TSNAXIP1Q2TAA8 658 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 MTFR2Q6P444 385 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 MBOAT1Q6ZNC8 495 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 DNAJB8Q8NHS0 232 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 STAG3L4Q8TBR4 150 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 BRIX1Q8TDN6 353 aaKnown RBP15.82■□□□□ 0.12
SF1-207ENST00000413951 C8orf44Q96CB5 159 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 THAP11Q96EK4 314 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 HIST1H2AHQ96KK5 128 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 ZIM3Q96PE6 472 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 HIST1H2AJQ99878 128 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 H2AFJQ9BTM1 129 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 TRIM54Q9BYV2 358 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.82■□□□□ 0.122e-9■■□□□ 11.8
SF1-207ENST00000413951 ALG9Q9H6U8 611 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 ARL15Q9NXU5 204 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 TEX15Q9BXT5 2789 aa15.82■□□□□ 0.12
SF1-207ENST00000413951 UTP20O75691 2785 aaKnown RBP15.81■□□□□ 0.12
SF1-207ENST00000413951 A0A1W2PPM1 405 aa15.81■□□□□ 0.12
SF1-207ENST00000413951 HNRNPRO43390 633 aaKnown RBP15.81■□□□□ 0.12
SF1-207ENST00000413951 MED26O95402 600 aa15.81■□□□□ 0.12
SF1-207ENST00000413951 SYF2O95926 243 aaKnown RBP15.81■□□□□ 0.12
SF1-207ENST00000413951 C8orf89P0DMQ9 161 aa15.81■□□□□ 0.12
SF1-207ENST00000413951 COL8A1P27658 744 aa15.81■□□□□ 0.12
SF1-207ENST00000413951 HNMTP50135 292 aa15.81■□□□□ 0.12
SF1-207ENST00000413951 RPS15AP62244 130 aaKnown RBP15.81■□□□□ 0.12
SF1-207ENST00000413951 HKDC1Q2TB90 917 aa15.81■□□□□ 0.12
SF1-207ENST00000413951 TNFAIP8L3Q5GJ75 292 aa15.81■□□□□ 0.12
SF1-207ENST00000413951 TECRLQ5HYJ1 363 aa15.81■□□□□ 0.12
SF1-207ENST00000413951 ABHD17BQ5VST6 288 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms