RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 FOXS1O43638 330 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 ZNF888P0CJ79 500 aaPredicted RBP29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 CHN1P15882 459 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 IL1RNP18510 177 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 SERPINB3P29508 390 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 OR1D4P47884 311 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 EMP3P54852 163 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 RAB8AP61006 207 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 RPS13P62277 151 aaKnown RBP29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 SLC9A5Q14940 896 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 HSP90B2PQ58FF3 399 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 GARNL3Q5VVW2 1013 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 UTP15Q8TED0 518 aaKnown RBP29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 NKD1Q969G9 470 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 MS4A8Q9BY19 250 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 C20orf27Q9GZN8 174 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 ELOVL6Q9H5J4 265 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 WDR70Q9NW82 654 aa29.07■■■□□ 2.24
CSNK1E-206ENST00000413574 PDYNP01213 254 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 NR1D1P20393 614 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 HMOX2P30519 316 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 HTR6P50406 440 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 PCBP4P57723 403 aaKnown RBP29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 IFT88Q13099 833 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 NDUFA9Q16795 377 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 CLEC6AQ6EIG7 209 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 OR9A4Q8NGU2 314 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 AGR3Q8TD06 166 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 MR1Q95460 341 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 MS4A6EQ96DS6 147 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 LRFN5Q96NI6 719 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 OR51B5Q9H339 312 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 LHX9Q9NQ69 397 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 TSC22D4Q9Y3Q8 395 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 APC2O95996 2303 aa29.06■■■□□ 2.24
CSNK1E-206ENST00000413574 A0A0G2JN53 185 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 SAP18O00422 153 aaKnown RBP29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 MANBAO00462 879 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 ENO1P06733 434 aaKnown RBP29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 LIPCP11150 499 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 PIK3CBP42338 1070 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 PDSS2Q86YH6 399 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 CACNA2D3Q8IZS8 1091 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 SLC29A3Q9BZD2 475 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 CHST8Q9H2A9 424 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 PADI1Q9ULC6 663 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 SNX6Q9UNH7 406 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 FIS1Q9Y3D6 152 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 CCDC88CQ9P219 2028 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 ETHE1O95571 254 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 KLK3P07288 261 aaPredicted RBP29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 CCNYL3P0C7X3 344 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 STXBP1P61764 594 aaKnown RBP29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 ABHD18Q0P651 414 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 FAM53BQ14153 422 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 SHISA5Q8N114 240 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 ESX1Q8N693 406 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 PROKR1Q8TCW9 393 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 SELENOMQ8WWX9 145 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 REXO4Q9GZR2 422 aaKnown RBP29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 MED4Q9NPJ6 270 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 SLC22A11Q9NSA0 550 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 ADGRE2Q9UHX3 823 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 SLC22A7Q9Y694 548 aa29.05■■■□□ 2.24
CSNK1E-206ENST00000413574 TMEM233B4DJY2 109 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 CRCPO75575 148 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 SERPINB1P30740 379 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 SERPINB5P36952 375 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 PLA2G16P53816 162 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 ABCE1P61221 599 aaKnown RBP29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 BST1Q10588 318 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 STX3Q13277 289 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 MAP7Q14244 749 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 ADPRMQ3LIE5 342 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 DEFB134Q4QY38 66 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 SCIMPQ6UWF3 145 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 AFAP1L2Q8N4X5 818 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 MMABQ96EY8 250 aaPredicted RBP29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 CMTM7Q96FZ5 175 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 EML4Q9HC35 981 aaKnown RBP29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 NAALAD2Q9Y3Q0 740 aa29.04■■■□□ 2.24
CSNK1E-206ENST00000413574 CFAP47Q6ZTR5 3102 aa29.03■■■□□ 2.24
CSNK1E-206ENST00000413574 SGK494L7N484 410 aa29.03■■■□□ 2.24
CSNK1E-206ENST00000413574 ERI3O43414 337 aaKnown RBP29.03■■■□□ 2.24
CSNK1E-206ENST00000413574 SMIM10L1P0DMW3 83 aa29.03■■■□□ 2.24
CSNK1E-206ENST00000413574 ALOX12P18054 663 aa29.03■■■□□ 2.24
CSNK1E-206ENST00000413574 DCDP81605 110 aaKnown RBP29.03■■■□□ 2.24
CSNK1E-206ENST00000413574 GALNT1Q10472 559 aaPredicted RBP29.03■■■□□ 2.24
CSNK1E-206ENST00000413574 ZNF517Q6ZMY9 492 aaPredicted RBP29.03■■■□□ 2.24
CSNK1E-206ENST00000413574 ABHD13Q7L211 337 aa29.03■■■□□ 2.24
CSNK1E-206ENST00000413574 SNIP1Q8TAD8 396 aaKnown RBP29.03■■■□□ 2.24
CSNK1E-206ENST00000413574 SMIM10Q96HG1 83 aa29.03■■■□□ 2.24
CSNK1E-206ENST00000413574 ANKHQ9HCJ1 492 aa29.03■■■□□ 2.24
CSNK1E-206ENST00000413574 ZDHHC2Q9UIJ5 367 aa29.03■■■□□ 2.24
CSNK1E-206ENST00000413574 ZNF860A6NHJ4 632 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 TMEM114B3SHH9 223 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 FOXE1O00358 373 aaPredicted RBP29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 HSPA4LO95757 839 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 KRT6AP02538 564 aa29.02■■■□□ 2.24
CSNK1E-206ENST00000413574 KRT6BP04259 564 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms