RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 CSTF2P33240 577 aaKnown RBP eCLIP24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 PLA2G16P53816 162 aa24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 CUL3Q13618 768 aa24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 KIAA0040Q15053 153 aa24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 C6orf136Q5SQH8 315 aa24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 NXNQ6DKJ4 435 aa24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 DTWD1Q8N5C7 304 aa24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 BCAS4Q8TDM0 211 aa24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 ACTRT2Q8TDY3 377 aa24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 N4BP2L2Q92802 583 aaPredicted RBP24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 OR6C1Q96RD1 312 aa24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 ZNF717Q9BY31 904 aaPredicted RBP24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 LRTM1Q9HBL6 345 aa24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 LHX9Q9NQ69 397 aa24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 TCF7L2Q9NQB0 619 aa24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 RIC8BQ9NVN3 520 aa24.7■■□□□ 1.54
RHBDD3-203ENST00000413137 PMS2P1A4D2B8 440 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 PLPP1O14494 284 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 SEC22BO75396 215 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 KCNK5O95279 499 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 RAB8AP61006 207 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 FOXM1Q08050 763 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 RGS1Q08116 209 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 CHSY3Q70JA7 882 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 BMPERQ8N8U9 685 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 AMER3Q8N944 861 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 AGBL5Q8NDL9 886 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 ZCCHC10Q8TBK6 192 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 UTP15Q8TED0 518 aaKnown RBP24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 CHTF18Q8WVB6 975 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 APMAPQ9HDC9 416 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 C1orf109Q9NX04 203 aa24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 APOBEC2Q9Y235 224 aaKnown RBP24.69■■□□□ 1.54
RHBDD3-203ENST00000413137 E9PBE3 544 aa24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 ERI3O43414 337 aaKnown RBP24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 KLHL41O60662 606 aa24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 ZNF888P0CJ79 500 aaPredicted RBP24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 PRPH2P23942 346 aa24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 ATP6AP1LQ52LC2 224 aa24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 TMEM214Q6NUQ4 689 aaKnown RBP24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 RIPOR1Q6ZS17 1223 aa24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 ALYREFQ86V81 257 aaKnown RBP24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 MARCH9Q86YJ5 346 aa24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 C1orf52Q8N6N3 182 aaKnown RBP24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 C11orf24Q96F05 449 aaPredicted RBP24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 MARK4Q96L34 752 aa24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 C17orf62Q9BQA9 187 aa24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 C1orf50Q9BV19 199 aa24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 PFDN4Q9NQP4 134 aa24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 IRAK4Q9NWZ3 460 aa24.68■■□□□ 1.54
RHBDD3-203ENST00000413137 WDFY3Q8IZQ1 3526 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 NPIPB8E9PQR5 432 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 OR2B3O76000 313 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 GBAP04062 536 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 RPL38P63173 70 aaKnown RBP24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 RAE1P78406 368 aaKnown RBP24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 ACAD11Q709F0 780 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 PRSS41Q7RTY9 318 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 ZFAND4Q86XD8 727 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 HOMEZQ8IX15 550 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 METTL4Q8N3J2 472 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 ZNF655Q8N720 491 aaPredicted RBP24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 PPP3R2Q96LZ3 170 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 C10orf90Q96M02 699 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 RILPQ96NA2 401 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 G3BP2Q9UN86 482 aaKnown RBP24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 CLCA2Q9UQC9 943 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 A0A1W2PNU3 283 aaPredicted RBP24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 VPS4BO75351 444 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 KLHL18O94889 574 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 ALDOCP09972 364 aaKnown RBP24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 SMIM10L1P0DMW3 83 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 CDK4P11802 303 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 BSGP35613 385 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 ACY1Q03154 408 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 TMEM35AQ53FP2 167 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 ABHD17CQ6PCB6 329 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 COMMD6Q7Z4G1 85 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 FNDC5Q8NAU1 212 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 OR2L5Q8NG80 312 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 CEP70Q8NHQ1 597 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 SMIM10Q96HG1 83 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 TEFMQ96QE5 360 aaKnown RBP24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 CTRCQ99895 268 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 CCDC28BQ9BUN5 200 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 EBPLQ9BY08 206 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 PRDM7Q9NQW5 492 aa24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 POLR3HQ9Y535 204 aaPredicted RBP24.67■■□□□ 1.54
RHBDD3-203ENST00000413137 KIF26BQ2KJY2 2108 aa24.66■■□□□ 1.54
RHBDD3-203ENST00000413137 DCDC2BA2VCK2 349 aa24.66■■□□□ 1.54
RHBDD3-203ENST00000413137 FITM1A5D6W6 292 aa24.66■■□□□ 1.54
RHBDD3-203ENST00000413137 NDUFAB1O14561 156 aa24.66■■□□□ 1.54
RHBDD3-203ENST00000413137 ZSCAN9O15535 394 aaPredicted RBP24.66■■□□□ 1.54
RHBDD3-203ENST00000413137 EEDO75530 441 aaKnown RBP24.66■■□□□ 1.54
RHBDD3-203ENST00000413137 TIAF1O95411 115 aa24.66■■□□□ 1.54
RHBDD3-203ENST00000413137 LBPP18428 481 aa24.66■■□□□ 1.54
RHBDD3-203ENST00000413137 STXBP1P61764 594 aaKnown RBP24.66■■□□□ 1.54
RHBDD3-203ENST00000413137 TCTE1Q5JU00 501 aa24.66■■□□□ 1.54
RHBDD3-203ENST00000413137 MANEAQ5SRI9 462 aa24.66■■□□□ 1.54
RHBDD3-203ENST00000413137 ZNF793Q6ZN11 406 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms