RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 HHIPL1Q96JK4 782 aa16.04■□□□□ 0.16
LIMS2-208ENST00000410011 REEP4Q9H6H4 257 aa16.04■□□□□ 0.16
LIMS2-208ENST00000410011 CD84Q9UIB8 345 aa16.04■□□□□ 0.16
LIMS2-208ENST00000410011 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.04■□□□□ 0.16
LIMS2-208ENST00000410011 FAM32AQ9Y421 112 aaKnown RBP16.04■□□□□ 0.16
LIMS2-208ENST00000410011 PCDHGA3Q9Y5H0 932 aa16.04■□□□□ 0.16
LIMS2-208ENST00000410011 SLC5A10A0PJK1 596 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 TRIM43BA6NCK2 446 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 KRT87PA6NCN2 255 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 ARRDC5A6NEK1 342 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 NPC1O15118 1278 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 KDM1AO60341 852 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 HLA-EP13747 358 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 GADD45AP24522 165 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 IMPA1P29218 277 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 LIMS1P48059 325 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 CYP4F8P98187 520 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 DDX39BQ13838 428 aaKnown RBP16.03■□□□□ 0.16
LIMS2-208ENST00000410011 PNCKQ6P2M8 343 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 ZNF605Q86T29 641 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 CMTM8Q8IZV2 173 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 PROX1Q92786 737 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 TMEM159Q96B96 161 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 ZNF558Q96NG5 402 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 VPS35Q96QK1 796 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 EHD1Q9H4M9 534 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 C1GALT1Q9NS00 363 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 ZNF226Q9NYT6 803 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 PNMA8BQ9ULN7 279 aaPredicted RBP16.03■□□□□ 0.16
LIMS2-208ENST00000410011 KCNE2Q9Y6J6 123 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 TRAV19A0A0A6YYK7 116 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 SH3D21A4FU49 640 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 CARNS1A5YM72 827 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 MTX2O75431 263 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 SNX4O95219 450 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 IFNA14P01570 189 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 CTSAP10619 480 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 ETV6P41212 452 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 EEF1A2Q05639 463 aaKnown RBP16.03■□□□□ 0.16
LIMS2-208ENST00000410011 CD300CQ08708 224 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 PDE7AQ13946 482 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 GCNT6Q5T4J0 391 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 MED27Q6P2C8 311 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 C19orf48Q6RUI8 117 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.03■□□□□ 0.16
LIMS2-208ENST00000410011 SLCO4C1Q6ZQN7 724 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 HSD11B1LQ7Z5J1 315 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 DDX53Q86TM3 631 aaKnown RBP16.03■□□□□ 0.16
LIMS2-208ENST00000410011 TMC8Q8IU68 726 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 HS6ST3Q8IZP7 471 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 OXR1Q8N573 874 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 CDC26Q8NHZ8 85 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 PSMA8Q8TAA3 256 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 RAET1EQ8TD07 263 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 SCAMP4Q969E2 229 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 HEPHQ9BQS7 1158 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 CDADC1Q9BWV3 514 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 SH3BP4Q9P0V3 963 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 TESMINQ9Y4I5 508 aa16.03■□□□□ 0.16
LIMS2-208ENST00000410011 TSPAN11A1L157 253 aa16.02■□□□□ 0.16
LIMS2-208ENST00000410011 LEFTY2O00292 366 aa16.02■□□□□ 0.16
LIMS2-208ENST00000410011 ZNF197O14709 1029 aa16.02■□□□□ 0.16
LIMS2-208ENST00000410011 DSCR3O14972 297 aa16.02■□□□□ 0.16
LIMS2-208ENST00000410011 MPZL2O60487 215 aa16.02■□□□□ 0.16
LIMS2-208ENST00000410011 SERPINB1P30740 379 aa16.02■□□□□ 0.16
LIMS2-208ENST00000410011 TGFBR1P36897 503 aa16.02■□□□□ 0.16
LIMS2-208ENST00000410011 ZNF763Q0D2J5 394 aa16.02■□□□□ 0.16
LIMS2-208ENST00000410011 KRR1Q13601 381 aaKnown RBP16.02■□□□□ 0.16
LIMS2-208ENST00000410011 SF1Q15637 639 aaKnown RBP16.02■□□□□ 0.16
LIMS2-208ENST00000410011 BTN2A2Q8WVV5 523 aa16.02■□□□□ 0.16
LIMS2-208ENST00000410011 CDCA4Q9BXL8 241 aa16.02■□□□□ 0.16
LIMS2-208ENST00000410011 CNOT2Q9NZN8 540 aaKnown RBP16.02■□□□□ 0.16
LIMS2-208ENST00000410011 ZBBXA8MT70 800 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 BNIP3LO60238 219 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 PTTG1O95997 202 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 ADORA3P0DMS8 318 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 ZNF8P17098 575 aaPredicted RBP16.02■□□□□ 0.15
LIMS2-208ENST00000410011 AQP1P29972 269 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 CRATP43155 626 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 PRLHRP49683 370 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 RGS6P49758 472 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 HBA1P69905 142 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 DMC1Q14565 340 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 ZNF630Q2M218 657 aaPredicted RBP16.02■□□□□ 0.15
LIMS2-208ENST00000410011 TRIM40Q6P9F5 258 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 Q6ZPB1 254 aaPredicted RBP16.02■□□□□ 0.15
LIMS2-208ENST00000410011 SLC30A8Q8IWU4 369 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 RAVER1Q8IY67 606 aaKnown RBP16.02■□□□□ 0.15
LIMS2-208ENST00000410011 LGI4Q8N135 537 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 ZNF557Q8N988 423 aaPredicted RBP16.02■□□□□ 0.15
LIMS2-208ENST00000410011 CHST14Q8NCH0 376 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 OR2A12Q8NGT7 310 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 CHAC2Q8WUX2 184 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 HPS1Q92902 700 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 MTERF3Q96E29 417 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 SCLYQ96I15 445 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 TXNDC15Q96J42 360 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 PKP4Q99569 1192 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 MAPKAP1Q9BPZ7 522 aa16.02■□□□□ 0.15
LIMS2-208ENST00000410011 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms