RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 RTP3Q9BQQ7 232 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 NUDT4Q9NZJ9 180 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 ZNF222Q9UK12 451 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 GABRQQ9UN88 632 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 PADI2Q9Y2J8 665 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 ZNF638Q14966 1978 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 PRAMEF33A0A0G2JMD5 474 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 A0A1B0GVI7 797 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 HAS3O00219 553 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 TNFRSF11BO00300 401 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 PLOD3O60568 738 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 PRAMEF10O60809 474 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 RPP40O75818 363 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 TP53P04637 393 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 ACSM4P0C7M7 580 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 CKMT1AP12532 417 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 LMO2P25791 158 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 S100A3P33764 101 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 BMP8BP34820 402 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 SOX3P41225 446 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 HOXA1P49639 335 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 NDUFV1P49821 464 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 ATP12AP54707 1039 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 EPHA5P54756 1037 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 ZNF169Q14929 603 aaPredicted RBP5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 PCBP2Q15366 365 aaKnown RBP eCLIP5.63□□□□□ -1.512e-7■■■□□ 17.8
R3HDM1-202ENST00000409478 DUSP6Q16828 381 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 MICAQ29983 383 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 RNLSQ5VYX0 342 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 MSANTD1Q6ZTZ1 278 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 TRILQ7L0X0 811 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 BMP8AQ7Z5Y6 402 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 VTCN1Q7Z7D3 282 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 GLCCI1Q86VQ1 547 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 OR10G2Q8NGC3 310 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 OR6M1Q8NGM8 313 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 FANK1Q8TC84 345 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 HGDQ93099 445 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 TBATAQ96M53 351 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 FEVQ99581 238 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 MAPKAP1Q9BPZ7 522 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 FANCFQ9NPI8 374 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 OSER1Q9NX31 292 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 LSM2Q9Y333 95 aaKnown RBP5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 THSD7AQ9UPZ6 1657 aa5.63□□□□□ -1.51
R3HDM1-202ENST00000409478 PRSS44E7EML9 344 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 HCRTO43612 131 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 GMDSO60547 372 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ADAM11O75078 769 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 GJB1P08034 283 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 CLEC2LP0C7M8 214 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ARF4P18085 180 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ITGALP20701 1170 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SSTR4P31391 388 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 CCR1P32246 355 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ZNF81P51508 661 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 DAOAP59103 153 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 MXD1Q05195 221 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 PPIGQ13427 754 aaKnown RBP eCLIP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 FCN2Q15485 313 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 CD276Q5ZPR3 534 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 DOK6Q6PKX4 331 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 FAM83AQ86UY5 434 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 PNPLA1Q8N8W4 532 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 TMEM145Q8NBT3 493 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 B3GALNT2Q8NCR0 500 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 REPS2Q8NFH8 660 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 OR4L1Q8NH43 312 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 TMEM163Q8TC26 289 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SLC9A6Q92581 669 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 RNF34Q969K3 372 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 MYLPFQ96A32 169 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 KCTD7Q96MP8 289 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 LINC00052Q96N35 136 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 RBP7Q96R05 134 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SOSTQ9BQB4 213 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SLC39A8Q9C0K1 460 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 PPP1R3EQ9H7J1 279 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SERHLQ9NQF3 203 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SDHAF2Q9NX18 166 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 PIM2Q9P1W9 311 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 FAM8A1Q9UBU6 413 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ZNF112Q9UJU3 913 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 LIPT1Q9Y234 373 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 CCL27Q9Y4X3 112 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 CITO14578 2027 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ZNF646O15015 1829 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SHROOM3Q8TF72 1996 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 A0A0A6YYJ9 748 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 MFSD2BA6NFX1 497 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ISM1B1AKI9 464 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 PPEF2O14830 753 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 LDB2O43679 373 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 TPST2O60704 377 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 CSO75390 466 aaKnown RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 ALDH1A1P00352 501 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 LALBAP00709 142 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 SLC10A3P09131 477 aa5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 HOXB9P17482 250 aaPredicted RBP5.62□□□□□ -1.51
R3HDM1-202ENST00000409478 MAPK1P28482 360 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms