RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 CPPED1Q9BRF8 314 aaPredicted RBP12.9□□□□□ -0.35
COL6A2-204ENST00000409416 EMILIN2Q9BXX0 1053 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 INIPQ9NRY2 104 aa12.9□□□□□ -0.35
COL6A2-204ENST00000409416 SAMD4AQ9UPU9 718 aaKnown RBP12.9□□□□□ -0.35
COL6A2-204ENST00000409416 TRPM6Q9BX84 2022 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 DOCK9Q9BZ29 2069 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 CACNA1EQ15878 2313 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 C9P02748 559 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 ZDHHC11BP0C7U3 371 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 ZNF8P17098 575 aaPredicted RBP12.89□□□□□ -0.35
COL6A2-204ENST00000409416 RAB8AP61006 207 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 B4GALNT1Q00973 533 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 DSG4Q86SJ6 1040 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 ADAMTS19Q8TE59 1207 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 FAR1Q8WVX9 515 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 MUL1Q969V5 352 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 DUSP26Q9BV47 211 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 PRR14Q9BWN1 585 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 ALOXE3Q9BYJ1 711 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 USE1Q9NZ43 259 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 FBXW2Q9UKT8 454 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 CCL27Q9Y4X3 112 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 NEUROG3Q9Y4Z2 214 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 ANKRD36A6QL64 1941 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 PCDH7O60245 1069 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 ETHE1O95571 254 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 CEBPBP17676 345 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 AZGP1P25311 298 aaKnown RBP12.89□□□□□ -0.35
COL6A2-204ENST00000409416 CD97P48960 835 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 COLEC12Q5KU26 742 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 CPZQ66K79 652 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 GTF2IRD2BQ6EKJ0 949 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 SLC16A12Q6ZSM3 486 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 ZNF551Q7Z340 670 aaPredicted RBP12.89□□□□□ -0.35
COL6A2-204ENST00000409416 GTF2IRD2Q86UP8 949 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 ZNF761Q86XN6 746 aaPredicted RBP12.89□□□□□ -0.35
COL6A2-204ENST00000409416 SCRN2Q96FV2 425 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 ART5Q96L15 291 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 ZNF347Q96SE7 839 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 TPT1P8Q9HAU6 139 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 SPHK2Q9NRA0 654 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 TAS2R16Q9NYV7 291 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 DNMT3BQ9UBC3 853 aaKnown RBP12.89□□□□□ -0.35
COL6A2-204ENST00000409416 VPS29Q9UBQ0 182 aa12.89□□□□□ -0.35
COL6A2-204ENST00000409416 TMEFF2Q9UIK5 374 aaPredicted RBP12.89□□□□□ -0.35
COL6A2-204ENST00000409416 A8MU76 341 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 UGT2B11O75310 529 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 FGBP02675 491 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 TNNI3P19429 210 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 CD72P21854 359 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 RRM2P31350 389 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 CLCNKAP51800 687 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 ATG9BQ674R7 924 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 FAM109BQ6ICB4 259 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-204ENST00000409416 LAIR2Q6ISS4 152 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 OR5AR1Q8NGP9 310 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 HUS1BQ8NHY5 278 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 MCFD2Q8NI22 146 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 NFKBIDQ8NI38 313 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 HTATIP2Q9BUP3 242 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 KCNH6Q9H252 994 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 GPN2Q9H9Y4 310 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-204ENST00000409416 IL21Q9HBE4 155 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 THUMPD1Q9NXG2 353 aaKnown RBP12.88□□□□□ -0.35
COL6A2-204ENST00000409416 DEC1Q9P2X7 70 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 DNMT3AQ9Y6K1 912 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-204ENST00000409416 TRIM64A6NGJ6 449 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 OR52A4PA6NMU1 304 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 TBX1O43435 398 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 NRIP1P48552 1158 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 CLK3P49761 638 aaKnown RBP12.88□□□□□ -0.35
COL6A2-204ENST00000409416 CLCA4Q14CN2 919 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 MED22Q15528 200 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 SOWAHCQ53LP3 525 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-204ENST00000409416 NAGSQ8N159 534 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 DTX3Q8N9I9 347 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 OR2A12Q8NGT7 310 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 CCDC115Q96NT0 180 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 F2RL3Q96RI0 385 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 THG1LQ9NWX6 298 aaKnown RBP12.88□□□□□ -0.35
COL6A2-204ENST00000409416 TRPS1Q9UHF7 1281 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 A0A096LPI6 279 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 ZNF860A6NHJ4 632 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 FADS2P1A8MWK0 482 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 FAM220BPB1ANY3 271 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 ADAM23O75077 832 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 OXSR1O95747 527 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-204ENST00000409416 INHBBP09529 407 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 JUNBP17275 347 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-204ENST00000409416 MAPK1P28482 360 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 CLDN8P56748 225 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 CREMQ03060 361 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 ABHD18Q0P651 414 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 INO80DQ53TQ3 878 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-204ENST00000409416 FAM26DQ5JW98 314 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 PRAMEF14Q5SWL7 426 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 NIPAL1Q6NVV3 410 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 CCDC149Q6ZUS6 474 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 SLC22A16Q86VW1 577 aa12.88□□□□□ -0.35
COL6A2-204ENST00000409416 C12orf40Q86WS4 652 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms