RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 MAU2Q9Y6X3 613 aa13.42□□□□□ -0.26
CHRNA1-204ENST00000409323 A0A0A6YYC8 382 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 GMNCA6NCL1 334 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 TMX2-CTNND1H3BSU7 103 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 I3L1I5 382 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 SRPX2O60687 465 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 CLEC3AO75596 197 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 SCRG1O75711 98 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 KIAA0754O94854 1291 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 CHEK2O96017 543 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 SERPINA6P08185 405 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 PIK3CBP42338 1070 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 OLR1P78380 273 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 PHEXP78562 749 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 RELAQ04206 551 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 SLC9A5Q14940 896 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 GALNTL6Q49A17 601 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 DEFB134Q4QY38 66 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 SPDYAQ5MJ70 313 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 CGB2Q6NT52 195 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 UBE3DQ7Z6J8 389 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 TTLQ8NG68 377 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 RFWD2Q8NHY2 731 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 PIWIL2Q8TC59 973 aaKnown RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 NT5CQ8TCD5 201 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 MS4A6EQ96DS6 147 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 THAP11Q96EK4 314 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 C19orf60Q96EN9 201 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 APIPQ96GX9 242 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 MAGEB10Q96LZ2 347 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 ZNF285Q96NJ3 590 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 SLC6A16Q9GZN6 736 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 PITHD1Q9GZP4 211 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 WDR55Q9H6Y2 383 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 CUTCQ9NTM9 273 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 HAO1Q9UJM8 370 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 DCTN4Q9UJW0 460 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 USH1CQ9Y6N9 552 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 WDFY3Q8IZQ1 3526 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 SEC16AO15027 2179 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 SDK2Q58EX2 2172 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 ARHGAP10A1A4S6 786 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 C9orf172C9J069 976 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 SGK494L7N484 410 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 PLPP1O14494 284 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 PEX11AO75192 247 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 OR1D4P47884 311 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 RAP1GDS1P52306 607 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 BTN3A2P78410 334 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 GRM7Q14831 915 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 NR6A1Q15406 480 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 SLC9B1Q4ZJI4 515 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 TCTE1Q5JU00 501 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 KHDRBS2Q5VWX1 349 aaKnown RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 TMEM214Q6NUQ4 689 aaKnown RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 Q6ZSR9 355 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 PDSS2Q86YH6 399 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 ARHGEF39Q8N4T4 335 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 TTC29Q8NA56 475 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 OR9A4Q8NGU2 314 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 OR8K5Q8NH50 307 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 UTP15Q8TED0 518 aaKnown RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 CLIP3Q96DZ5 547 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 CMTM7Q96FZ5 175 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 SCNM1Q9BWG6 230 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 EBPLQ9BY08 206 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 NLNQ9BYT8 704 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 ULBP3Q9BZM4 244 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 AKIRIN1Q9H9L7 192 aaPredicted RBP13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 FBXO8Q9NRD0 319 aa13.41□□□□□ -0.26
CHRNA1-204ENST00000409323 CCDC88CQ9P219 2028 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 B4E171 279 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 FOXE1O00358 373 aaPredicted RBP13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 DIAPH2O60879 1101 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 FAM107AO95990 144 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 FGF5P12034 268 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 CERS1P27544 350 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 EPHA3P29320 983 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 TSPAN7P41732 249 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 FOXL2P58012 376 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 MAT1AQ00266 395 aaKnown RBP13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 PWP1Q13610 501 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 IL11RAQ14626 422 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 SYT16Q17RD7 645 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 DCAF12Q5T6F0 453 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 DEPDC1Q5TB30 811 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 ZNF793Q6ZN11 406 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 AFAP1L2Q8N4X5 818 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 C1orf52Q8N6N3 182 aaKnown RBP13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 OR5T3Q8NGG3 340 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 TUBGCP3Q96CW5 907 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 SLC45A3Q96JT2 553 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 TEFMQ96QE5 360 aaKnown RBP13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 TAAR9Q96RI9 348 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 EBF4Q9BQW3 602 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 NDC1Q9BTX1 674 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 ACTR5Q9H9F9 607 aaPredicted RBP13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 LHX9Q9NQ69 397 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms