RNA–Protein interactions for RNA: ENST00000405943.3

HDGFP1-201, Transcript of heparin binding growth factor pseudogene 1, humanhuman

BASIC

Gene HDGFP1, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP1-201ENST00000405943 GADD45GO95257 159 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CPSF4O95639 269 aaKnown RBP4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 APBA3O96018 575 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 ADAP00813 363 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 PDYNP01213 254 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 IFNW1P05000 195 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CYP17A1P05093 508 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 RPLP2P05387 115 aaKnown RBP4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 TPOP07202 933 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CSF3P09919 207 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 OR56A5P0C7T3 313 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 PIRTP0C851 137 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 SMIM10L2AP0DMW4 78 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 SMIM10L2BP0DMW5 78 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CYP2A6P11509 494 aaPredicted RBP4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 PEPDP12955 493 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 IFI30P13284 250 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 HSD3B1P14060 373 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 ITGB6P18564 788 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 SDC1P18827 310 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 TNNI3P19429 210 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 TYMPP19971 482 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 ITGALP20701 1170 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 HSD3B2P26439 372 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 PTPN6P29350 595 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 GPC1P35052 558 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CDKN2CP42773 168 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CRISP1P54107 249 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CDH12P55289 794 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 PER3P56645 1201 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 SMIM11AP58511 58 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 EN1Q05925 392 aaPredicted RBP4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 RING1Q06587 406 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CACNB2Q08289 660 aaPredicted RBP4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 SMARCB1Q12824 385 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 HNRNPA0Q13151 305 aaKnown RBP4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 ADAM15Q13444 863 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 IL18Q14116 193 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 VGLL4Q14135 290 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 ARHGEF7Q14155 803 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 DSC3Q14574 896 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 PTGES3Q15185 160 aaKnown RBP4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 RGNQ15493 299 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 ZNF79Q15937 498 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 SSX1Q16384 188 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 OCLNQ16625 522 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 EXOC3L2Q2M3D2 409 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 DUSP28Q4G0W2 176 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 KLHL22Q53GT1 634 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 SOWAHCQ53LP3 525 aaPredicted RBP4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 ALFQ53S48 1182 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 GCNT6Q5T4J0 391 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CPTPQ5TA50 214 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 NDUFAF5Q5TEU4 345 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 HACD4Q5VWC8 232 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 FAM219BQ5XKK7 198 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 FAM205BPQ63HN1 556 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 FRG2Q64ET8 278 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 RAP1GAP2Q684P5 730 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CCSAPQ6IQ19 270 aaPredicted RBP4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 SDE2Q6IQ49 451 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 PSAPL1Q6NUJ1 521 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 NOXRED1Q6NXP6 359 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 TAPT1Q6NXT6 567 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 FBXL22Q6P050 247 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 SBSNQ6UWP8 590 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CCDC149Q6ZUS6 474 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 USP30Q70CQ3 517 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 SAMD7Q7Z3H4 446 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 C16orf62Q7Z3J2 963 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 PRRT2Q7Z6L0 340 aaPredicted RBP4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 VTCN1Q7Z7D3 282 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 LAPTM4BQ86VI4 370 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 ANKRD46Q86W74 232 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 SCN4BQ8IWT1 228 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 GPALPP1Q8IXQ4 340 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 ZNF683Q8IZ20 524 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 Q8N402 240 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 PGBD5Q8N414 524 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 LINC00471Q8N535 108 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 OXR1Q8N573 874 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 NANOGP1Q8N7R0 232 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 PNPLA1Q8N8W4 532 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 PLA2G15Q8NCC3 412 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 SLC37A3Q8NCC5 494 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 FBXO22Q8NEZ5 403 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 OR4C15Q8NGM1 316 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 OR8J1Q8NGP2 316 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CLHC1Q8NHS4 586 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 TMEM163Q8TC26 289 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 ZNF431Q8TF32 576 aaPredicted RBP4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 ACOT12Q8WYK0 555 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 PHF21AQ96BD5 680 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 REPS1Q96D71 796 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CHFRQ96EP1 664 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 CDCA5Q96FF9 252 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 RADILQ96JH8 1075 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 EGLN2Q96KS0 407 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 C7orf34Q96L11 122 aa4.35□□□□□ -1.71
HDGFP1-201ENST00000405943 ZSWIM3Q96MP5 696 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms