RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 FAM90A24PP0C7X0 464 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 CALCBP10092 127 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 MSX1P28360 303 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 RORAP35398 523 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 PCK1P35558 622 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 CTSKP43235 329 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 GPR15P49685 360 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 PLK1P53350 603 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 MAXP61244 160 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 PHEXP78562 749 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 INCA1Q0VD86 236 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 POU6F1Q14863 301 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 PHYHD1Q5SRE7 291 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 VARS2Q5ST30 1063 aaKnown RBP5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 LRRC66Q68CR7 880 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 PAQR9Q6ZVX9 377 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 USP30Q70CQ3 517 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 GAREM2Q75VX8 874 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 TFAP2DQ7Z6R9 452 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 C10orf107Q8IVU9 208 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 MEIOBQ8N635 442 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 CLEC1AQ8NC01 280 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 SMG8Q8ND04 991 aaKnown RBP5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 ZNF680Q8NEM1 530 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 TTLQ8NG68 377 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 OR8J2Q8NGG1 315 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 PCED1BQ96HM7 432 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 ZSWIM3Q96MP5 696 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 KCMF1Q9P0J7 381 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 TMEM216Q9P0N5 145 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 PAK5Q9P286 719 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 SLC24A2Q9UI40 661 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 PLA2G4CQ9UP65 541 aa5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 PRG3Q9Y2Y8 225 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-202ENST00000399438 ATXN2Q99700 1313 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 GOLGA4Q13439 2230 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 MYO15AQ9UKN7 3530 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 A0A087WWL8 130 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 ARHGAP42A6NI28 874 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 C4orf47A7E2U8 309 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 EEF2KO00418 725 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 POLR1CO15160 346 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 GRM6O15303 877 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 SNNO75324 88 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 TRIM3O75382 744 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 PMPCBO75439 489 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 PRKCGP05129 697 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 SNRPAP09012 282 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 PIRTP0C851 137 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 DDCP20711 480 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 PTNP21246 168 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 IL32P24001 234 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 CTGFP29279 349 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 ETV4P43268 484 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 CLCN5P51795 746 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 BST2Q10589 180 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 FADDQ13158 208 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 MSLNQ13421 630 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 ACSBG2Q5FVE4 666 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 RNF43Q68DV7 783 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 SLC9A4Q6AI14 798 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 CLEC20AQ6ZU45 233 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 YRDCQ86U90 279 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 CIR1Q86X95 450 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 YAF2Q8IY57 180 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 LINC01465Q8N7H1 131 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 TFB1MQ8WVM0 346 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 TMA16Q96EY4 203 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 RRNAD1Q96FB5 475 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 ZNF419Q96HQ0 510 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 APOLD1Q96LR9 279 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 CITED1Q99966 193 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 FBXO44Q9H4M3 255 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 ATP13A3Q9H7F0 1226 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 AGO3Q9H9G7 860 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 XPNPEP3Q9NQH7 507 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 ZNF275Q9NSD4 429 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 TMLHEQ9NVH6 421 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 PLXNA1Q9UIW2 1896 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 GGA2Q9UJY4 613 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 STARD13Q9Y3M8 1113 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 LOXHD1Q8IVV2 1947 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 A6NL46 340 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 SRRM3A6NNA2 597 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 C12orf71A8MTZ7 269 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 C9JVG2 144 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 ZWINTO95229 277 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 C1QAP02745 245 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 IDO1P14902 403 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 ELNP15502 786 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 RPA2P15927 270 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 PTPN1P18031 435 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 POU1F1P28069 291 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 TYK2P29597 1187 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 CD52P31358 61 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 AKT2P31751 481 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 TAF6P49848 677 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 STILQ15468 1287 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 SYT16Q17RD7 645 aa5.98□□□□□ -1.45
TRAPPC13-202ENST00000399438 HKDC1Q2TB90 917 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms