RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 PIK3CBP42338 1070 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ATP1A2P50993 1020 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ARSFP54793 590 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 RPS13P62277 151 aaKnown RBP11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GALNT1Q10472 559 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ASPHQ12797 758 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CLN3Q13286 438 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 DDX39BQ13838 428 aaKnown RBP11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MAP7Q14244 749 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 HIST2H2ACQ16777 129 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MANEAQ5SRI9 462 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 YOD1Q5VVQ6 348 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 FRG2Q64ET8 278 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 HIST2H2AA3Q6FI13 130 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 FAM199XQ6PEV8 388 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 C6orf15Q6UXA7 325 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TBC1D19Q8N5T2 526 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 AMER3Q8N944 861 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 NKD1Q969G9 470 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 UBE2E3Q969T4 207 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MS4A6EQ96DS6 147 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CLIP3Q96DZ5 547 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 QRFPRQ96P65 431 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 FRG2BQ96QU4 278 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 F2RL3Q96RI0 385 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 HBEGFQ99075 208 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SORT1Q99523 831 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 NDC1Q9BTX1 674 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 OR51B5Q9H339 312 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 LHX9Q9NQ69 397 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 NKIRAS1Q9NYS0 192 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 STK38LQ9Y2H1 464 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SLC22A7Q9Y694 548 aa11.79□□□□□ -0.52
HLA-DQB1-203ENST00000399082 DMXL2Q8TDJ6 3036 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 A0A0G2JN53 185 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 LOC101059948A0A1B0GTJ6 334 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ANKDD1BA6NHY2 528 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 FOXE1O00358 373 aaPredicted RBP11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TXNDC9O14530 226 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SH3BGRLO75368 114 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ONECUT2O95948 504 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TGFB1P01137 390 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PDYNP01213 254 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ENO1P06733 434 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 LIPCP11150 499 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 NR1D1P20393 614 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 F8A1P23610 371 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SERPINB3P29508 390 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SERPINB5P36952 375 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 STAT5AP42229 794 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 OR1D4P47884 311 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 FOXL2P58012 376 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 RAB8AP61006 207 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 BST1Q10588 318 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 FAM53BQ14153 422 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 SLC9A5Q14940 896 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MUM1Q2TAK8 710 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 FAM214AQ32MH5 1076 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 UGT3A2Q3SY77 523 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 DEPDC1Q5TB30 811 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CLEC6AQ6EIG7 209 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 NLGN4XQ8N0W4 816 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 NLGN4YQ8NFZ3 816 aaPredicted RBP11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 OR9A4Q8NGU2 314 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PROKR1Q8TCW9 393 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CCT6BQ92526 530 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 FGF11Q92914 225 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 GAL3ST3Q96A11 431 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MTFMTQ96DP5 389 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ZNF717Q9BY31 904 aaPredicted RBP11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CHST8Q9H2A9 424 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 TUBB1Q9H4B7 451 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PPT2Q9UMR5 302 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 PTGDR2Q9Y5Y4 395 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 MAU2Q9Y6X3 613 aa11.78□□□□□ -0.52
HLA-DQB1-203ENST00000399082 CELSR3Q9NYQ7 3312 aa11.77□□□□□ -0.52
HLA-DQB1-203ENST00000399082 ZNF860A6NHJ4 632 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TMEM114B3SHH9 223 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SGK494L7N484 410 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SAP18O00422 153 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RTCAO00442 366 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PLPP1O14494 284 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 GALR3O60755 368 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SNNO75324 88 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KLHL18O94889 574 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 NSA2O95478 260 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 HBQ1P09105 142 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ALOX12P18054 663 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 WT1P19544 449 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ALAS2P22557 587 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SERPINB1P30740 379 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PCBP4P57723 403 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ABCE1P61221 599 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RGS1Q08116 209 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ABRAXAS2Q15018 415 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 NKAIN1Q4KMZ8 207 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 DEFB134Q4QY38 66 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SGO1Q5FBB7 561 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 FAM69BQ5VUD6 431 aa11.77□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KHDRBS2Q5VWX1 349 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms