RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 TMEM221A6NGB7 291 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 CLCA1A8K7I4 914 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 FADS2P1A8MWK0 482 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 E9PQ18 207 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 HLA-EP13747 358 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 ETFAP13804 333 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 CD40LGP29965 261 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 PBLDP30039 288 aaPredicted RBP12.6□□□□□ -0.39
PRAME-201ENST00000398741 CTSKP43235 329 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 PRIM2P49643 509 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 CTSCP53634 463 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 ATN1P54259 1190 aaPredicted RBP12.6□□□□□ -0.39
PRAME-201ENST00000398741 PNLIPRP1P54315 467 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 ZNF404Q494X3 552 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 AGAP7PQ5VUJ5 663 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 TMCO2Q7Z6W1 182 aaPredicted RBP12.6□□□□□ -0.39
PRAME-201ENST00000398741 ZNF605Q86T29 641 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 SLC22A16Q86VW1 577 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 TMEM25Q86YD3 366 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 LGI4Q8N135 537 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 DEPDC4Q8N2C3 294 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 DNAJC22Q8N4W6 341 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 OR4K1Q8NGD4 311 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 RHOXF1Q8NHV9 184 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 UTP15Q8TED0 518 aaKnown RBP12.6□□□□□ -0.39
PRAME-201ENST00000398741 PSD2Q9BQI7 771 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 HEPHQ9BQS7 1158 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 SLC35A5Q9BS91 424 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 MMP27Q9H306 513 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 REEP4Q9H6H4 257 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.6□□□□□ -0.392e-30■□□□□ 9.2
PRAME-201ENST00000398741 INIPQ9NRY2 104 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 ZNF229Q9UJW7 825 aa12.6□□□□□ -0.39
PRAME-201ENST00000398741 TGM5O43548 720 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 CDK1P06493 297 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 ITGA2P17301 1181 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 LAG3P18627 525 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 UGT2B10P36537 528 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 MAPK9P45984 424 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 OR1E2P47887 323 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 TMED10P49755 219 aaKnown RBP12.59□□□□□ -0.39
PRAME-201ENST00000398741 ZNF763Q0D2J5 394 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 SCARB2Q14108 478 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 PRSS36Q5K4E3 855 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 COX20Q5RI15 118 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 CATSPEREQ5SY80 951 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 HENMT1Q5T8I9 393 aaKnown RBP12.59□□□□□ -0.39
PRAME-201ENST00000398741 USP43Q70EL4 1123 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 KLHDC8AQ8IYD2 350 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 CADM3Q8N126 398 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 STX19Q8N4C7 294 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 LILRA3Q8N6C8 439 aaPredicted RBP12.59□□□□□ -0.39
PRAME-201ENST00000398741 OR56A3Q8NH54 315 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 GGHQ92820 318 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 TCF25Q9BQ70 676 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 CORO1BQ9BR76 489 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 CCM2Q9BSQ5 444 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 SLC46A2Q9BY10 475 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 C6orf62Q9GZU0 229 aaPredicted RBP12.59□□□□□ -0.39
PRAME-201ENST00000398741 ZNF556Q9HAH1 456 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 TMEM184CQ9NVA4 438 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 IMPAD1Q9NX62 359 aa12.59□□□□□ -0.39
PRAME-201ENST00000398741 TMEM229AB2RXF0 380 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 WASH3PC4AMC7 463 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 M0R082 166 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 GCM2O75603 506 aaPredicted RBP12.58□□□□□ -0.39
PRAME-201ENST00000398741 LEFTY1O75610 366 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 C6orf47O95873 294 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 RPLP0P05388 317 aaKnown RBP12.58□□□□□ -0.39
PRAME-201ENST00000398741 GADD45AP24522 165 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 SLC19A1P41440 591 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 LBX1P52954 281 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 NUDT6P53370 316 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 HBA1P69905 142 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 FCHO2Q0JRZ9 810 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 MICAQ29983 383 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 EXOC3L2Q2M3D2 409 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 ZNF385BQ569K4 471 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 MLIPQ5VWP3 458 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 ZNF852Q6ZMS4 543 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 TSEN54Q7Z6J9 526 aaKnown RBP12.58□□□□□ -0.39
PRAME-201ENST00000398741 SYTL1Q8IYJ3 562 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 RASGEF1AQ8N9B8 481 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 OR52N2Q8NGI0 321 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 NFKBIDQ8NI38 313 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 BTN2A2Q8WVV5 523 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 NEIL2Q969S2 332 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 POLE4Q9NR33 117 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 ABCB10Q9NRK6 738 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 ATP6V1HQ9UI12 483 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 DUSP12Q9UNI6 340 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 CCL26Q9Y258 94 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 DYRK1BQ9Y463 629 aa12.58□□□□□ -0.39
PRAME-201ENST00000398741 SCN5AQ14524 2016 aa12.58□□□□□ -0.4
PRAME-201ENST00000398741 SLC5A10A0PJK1 596 aa12.58□□□□□ -0.4
PRAME-201ENST00000398741 NRG2O14511 850 aaPredicted RBP12.58□□□□□ -0.4
PRAME-201ENST00000398741 GBAP04062 536 aa12.58□□□□□ -0.4
PRAME-201ENST00000398741 SRPRAP08240 638 aaKnown RBP12.58□□□□□ -0.4
PRAME-201ENST00000398741 DBTP11182 482 aaKnown RBP12.58□□□□□ -0.4
PRAME-201ENST00000398741 SERPINB1P30740 379 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms