RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 GALTP07902 379 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 RPS19P39019 145 aaKnown RBP13.39□□□□□ -0.27
NUP98-204ENST00000397004 NSG1P42857 185 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 CCL23P55773 120 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 TSTQ16762 297 aaKnown RBP13.39□□□□□ -0.27
NUP98-204ENST00000397004 LEXMQ3ZCV2 418 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 MSANTD1Q6ZTZ1 278 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 OTOP2Q7RTS6 562 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 BCDIN3DQ7Z5W3 292 aaKnown RBP13.39□□□□□ -0.27
NUP98-204ENST00000397004 UTP15Q8TED0 518 aaKnown RBP13.39□□□□□ -0.27
NUP98-204ENST00000397004 MYLIPQ8WY64 445 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 WFDC6Q9BQY6 131 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 DUSP26Q9BV47 211 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 RETREG1Q9H6L5 497 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 RMI1Q9H9A7 625 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 ACER3Q9NUN7 267 aa13.39□□□□□ -0.27
NUP98-204ENST00000397004 THSD7BQ9C0I4 1608 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 SAGE2PA6NJ88 616 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 LRRTM2O43300 516 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 CA12O43570 354 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 ASNA1O43681 348 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 TNFRSF21O75509 655 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 TNFSF8P32971 234 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 MC1RQ01726 317 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 BCL2L1Q07817 233 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 SREBF2Q12772 1141 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 DOC2AQ14183 400 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 PTGES3Q15185 160 aaKnown RBP13.38□□□□□ -0.27
NUP98-204ENST00000397004 CRIPAKQ8N1N5 446 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 FCGR1BQ92637 280 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 GTPBP3Q969Y2 492 aaKnown RBP13.38□□□□□ -0.27
NUP98-204ENST00000397004 GDF15Q99988 308 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 TRIM39Q9HCM9 518 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 VPS29Q9UBQ0 182 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 FAM8A1Q9UBU6 413 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 NINQ8N4C6 2090 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 MYOFQ9NZM1 2061 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 PCM1Q15154 2024 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 SERTM1A2A2V5 107 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 FFAR1O14842 300 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 SOX3P41225 446 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 EEF1A2Q05639 463 aaKnown RBP13.38□□□□□ -0.27
NUP98-204ENST00000397004 PLD1Q13393 1074 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 GPR50Q13585 617 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 FLYWCH1Q4VC44 716 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 RASGRP3Q8IV61 690 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 UBQLNLQ8IYU4 475 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 C1orf52Q8N6N3 182 aaKnown RBP13.38□□□□□ -0.27
NUP98-204ENST00000397004 ASB15Q8WXK1 588 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 OPALINQ96PE5 141 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 HHATLQ9HCP6 504 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 SH2B3Q9UQQ2 575 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 ANKRD34BA5PLL1 514 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 CD70P32970 193 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 FEN1P39748 380 aaKnown RBP13.38□□□□□ -0.27
NUP98-204ENST00000397004 AP1S1P61966 158 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 SRSF11Q05519 484 aaKnown RBP13.38□□□□□ -0.27
NUP98-204ENST00000397004 GANABQ14697 944 aaKnown RBP13.38□□□□□ -0.27
NUP98-204ENST00000397004 MICAQ29983 383 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 MMP21Q8N119 569 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 LGI4Q8N135 537 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 AMER2Q8N7J2 671 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 CIDECQ96AQ7 238 aaPredicted RBP13.38□□□□□ -0.27
NUP98-204ENST00000397004 SLC6A18Q96N87 628 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 ZDHHC3Q9NYG2 299 aa13.38□□□□□ -0.27
NUP98-204ENST00000397004 MN1Q10571 1320 aaPredicted RBP13.38□□□□□ -0.27
NUP98-204ENST00000397004 ZW10O43264 779 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 GUCY1B2O75343 617 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 CCNKO75909 580 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 GASTP01350 101 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 SMAD3P84022 425 aaKnown RBP13.37□□□□□ -0.27
NUP98-204ENST00000397004 IER5LQ5T953 404 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 ERICH5Q6P6B1 374 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 GATAD2AQ86YP4 633 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 CSGALNACT1Q8TDX6 532 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 COL21A1Q96P44 957 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 FAM120CQ9NX05 1096 aaKnown RBP13.37□□□□□ -0.27
NUP98-204ENST00000397004 TMEM98Q9Y2Y6 226 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 DOCK6Q96HP0 2047 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 PDE4DIPQ5VU43 2346 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 HOXB6P17509 224 aaKnown RBP13.37□□□□□ -0.27
NUP98-204ENST00000397004 PCGF2P35227 344 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 FLT3LGP49771 235 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 GPR33Q49SQ1 333 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 MPPE1Q53F39 396 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 PAQR6Q6TCH4 344 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 LAS2Q8IYD9 372 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 MGLLQ99685 303 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 PLXND1Q9Y4D7 1925 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 EFEMP2O95967 443 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 CKMT1AP12532 417 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 SRCP12931 536 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 SLC15A1P46059 708 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 ZNF770Q6IQ21 691 aaPredicted RBP13.37□□□□□ -0.27
NUP98-204ENST00000397004 SLC8B1Q6J4K2 584 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 GPR156Q8NFN8 814 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 MYDGFQ969H8 173 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 YME1L1Q96TA2 773 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 DNAJC11Q9NVH1 559 aa13.37□□□□□ -0.27
NUP98-204ENST00000397004 TMEM161AQ9NX61 479 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms