RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 SPENQ96T58 3664 aaKnown RBP12.96□□□□□ -0.33
CXCL12-205ENST00000395794 TRAV17A0A0B4J275 112 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 IGHV3-20A0A0C4DH32 117 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 BLACEA4D250 179 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 MAGEB17A8MXT2 336 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 CLGNO14967 610 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 CHST10O43529 356 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 URI1O94763 535 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-205ENST00000395794 CBX6O95503 412 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 FHP07954 510 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 SERPINA6P08185 405 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 CELA2AP08217 269 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 ITGAMP11215 1152 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 GSTM2P28161 218 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 SOX11P35716 441 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 GDF5P43026 501 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 GPX6P59796 221 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 RAB8AP61006 207 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 SNRPNP63162 240 aaKnown RBP12.96□□□□□ -0.33
CXCL12-205ENST00000395794 ZNF33BQ06732 778 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 SRSF1Q07955 248 aaKnown RBP eCLIP12.96□□□□□ -0.33
CXCL12-205ENST00000395794 NAB1Q13506 487 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 SLMAPQ14BN4 828 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 KBTBD12Q3ZCT8 623 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 PLAG1Q6DJT9 500 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 SULT1C3Q6IMI6 304 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 TMIGD1Q6UXZ0 262 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 CEP128Q6ZU80 1094 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 LANCL3Q6ZV70 420 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 ZNF572Q7Z3I7 529 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-205ENST00000395794 ANKRD37Q7Z713 158 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 TBC1D1Q86TI0 1168 aaPredicted RBP12.96□□□□□ -0.33
CXCL12-205ENST00000395794 SPATA6LQ8N4H0 392 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 SNX31Q8N9S9 440 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 CATSPER1Q8NEC5 780 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 OR5T3Q8NGG3 340 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 UTP15Q8TED0 518 aaKnown RBP12.96□□□□□ -0.33
CXCL12-205ENST00000395794 FBF1Q8TES7 1133 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 CCT6BQ92526 530 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 PSMF1Q92530 271 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 HAS2Q92819 552 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 LPAR4Q99677 370 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 UNKQ9C0B0 810 aaKnown RBP12.96□□□□□ -0.33
CXCL12-205ENST00000395794 DNAJC11Q9NVH1 559 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 PLA2G3Q9NZ20 509 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 STMN3Q9NZ72 180 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 GPRC5BQ9NZH0 403 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 ABI3Q9P2A4 366 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 RNF112Q9ULX5 631 aa12.96□□□□□ -0.33
CXCL12-205ENST00000395794 NUP210LQ5VU65 1888 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 ANKRD12Q6UB98 2062 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 A0A088AWK7 358 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 OR2W5A6NFC9 320 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 STK16O75716 305 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 GP1BBP13224 206 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 CD1DP15813 335 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 ZNF10P21506 573 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-205ENST00000395794 CRABP2P29373 138 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 PHBP35232 272 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 SLC6A12P48065 614 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 TNFSF10P50591 281 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 OR4D2P58180 307 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 OLR1P78380 273 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 SLC7A5Q01650 507 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 SLBPQ14493 270 aaKnown RBP eCLIP12.95□□□□□ -0.34
CXCL12-205ENST00000395794 SFT2D3Q587I9 215 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 TOR1AIP1Q5JTV8 583 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 RPUSD3Q6P087 351 aaKnown RBP12.95□□□□□ -0.34
CXCL12-205ENST00000395794 SLCO4C1Q6ZQN7 724 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 KLHDC8AQ8IYD2 350 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 BCORP1Q8N888 145 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 ANKRD53Q8N9V6 530 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 PLPP5Q8NEB5 264 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 ARMC2Q8NEN0 867 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 STAG3L4Q8TBR4 150 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 GRHL3Q8TE85 626 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 SSC4DQ8WTU2 575 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 SEC16BQ96JE7 1060 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 ZNF354BQ96LW1 612 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 C16orf45Q96MC5 204 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-205ENST00000395794 SLC6A16Q9GZN6 736 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 PITHD1Q9GZP4 211 aaPredicted RBP12.95□□□□□ -0.34
CXCL12-205ENST00000395794 RNF32Q9H0A6 362 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 SPNS1Q9H2V7 528 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 KCNK13Q9HB14 408 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 NMRAL1Q9HBL8 299 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 HEATR5BQ9P2D3 2071 aa12.95□□□□□ -0.34
CXCL12-205ENST00000395794 ANKDD1BA6NHY2 528 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 PRMT3O60678 531 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 B4GALT2O60909 372 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 WISP3O95389 354 aaPredicted RBP12.94□□□□□ -0.34
CXCL12-205ENST00000395794 DDAH2O95865 285 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 WDPCPO95876 746 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 RNH1P13489 461 aaKnown RBP12.94□□□□□ -0.34
CXCL12-205ENST00000395794 GGT5P36269 586 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 HSPA7P48741 367 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 EFNA3P52797 238 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 TAS2R50P59544 299 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 RHAGQ02094 409 aa12.94□□□□□ -0.34
CXCL12-205ENST00000395794 LAPTM5Q13571 262 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms