RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 NDUFS4O43181 175 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 HIST1H2AGP0C0S8 130 aaPredicted RBP8.33□□□□□ -1.08
ATG4A-205ENST00000394892 ZNF888P0CJ79 500 aaPredicted RBP8.33□□□□□ -1.08
ATG4A-205ENST00000394892 CD1DP15813 335 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 ALOX12P18054 663 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 HIST1H2ADP20671 130 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 CCND1P24385 295 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 MST1P26927 711 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 HNRNPH1P31943 449 aaKnown RBP8.33□□□□□ -1.08
ATG4A-205ENST00000394892 HNF4AP41235 474 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 HNRNPFP52597 415 aaKnown RBP8.33□□□□□ -1.08
ATG4A-205ENST00000394892 PLTPP55058 493 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 RAB8AP61006 207 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 PWP1Q13610 501 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 RUNX2Q13950 521 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 PCM1Q15154 2024 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 TLR1Q15399 786 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 MINDY4Q4G0A6 757 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 ZNF468Q5VIY5 522 aaPredicted RBP8.33□□□□□ -1.08
ATG4A-205ENST00000394892 PLAG1Q6DJT9 500 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 RIPOR1Q6ZS17 1223 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 CYS1Q717R9 158 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 CMC1Q7Z7K0 106 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 TMPRSS11BQ86T26 416 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 ZNF227Q86WZ6 799 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 PALM2Q8IXS6 379 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 KIF2BQ8N4N8 673 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 NKAPQ8N5F7 415 aaKnown RBP8.33□□□□□ -1.08
ATG4A-205ENST00000394892 TMEM52Q8NDY8 209 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 OR1N1Q8NGS0 311 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 PYROXD1Q8WU10 500 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 FAR1Q8WVX9 515 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 HIST1H2AHQ96KK5 128 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 UBXN10Q96LJ8 280 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 QRFPRQ96P65 431 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 RBBP8Q99708 897 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 HIST1H2AJQ99878 128 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 H2AFJQ9BTM1 129 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 TUBB6Q9BUF5 446 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 HES7Q9BYE0 225 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 DERL2Q9GZP9 239 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 PELI2Q9HAT8 420 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 ANKHQ9HCJ1 492 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 ZDHHC18Q9NUE0 388 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 RIC8BQ9NVN3 520 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 CTNNAL1Q9UBT7 734 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 ZFP69BQ9UJL9 534 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 ZNF490Q9ULM2 529 aaPredicted RBP8.33□□□□□ -1.08
ATG4A-205ENST00000394892 HIVEP3Q5T1R4 2406 aa8.33□□□□□ -1.08
ATG4A-205ENST00000394892 IGKV3D-11A0A0A0MRZ8 115 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 A0A0G2JN53 185 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 NCF1BA6NI72 391 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-205ENST00000394892 NCF1CA8MVU1 366 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-205ENST00000394892 EIF3HO15372 352 aaKnown RBP eCLIP8.32□□□□□ -1.08
ATG4A-205ENST00000394892 SERPIND1P05546 499 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 FHP07954 510 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 CCDC166P0CW27 439 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 NCF1P14598 390 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-205ENST00000394892 CXCR2P25025 360 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 AHRP35869 848 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 GGT5P36269 586 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 AGTR2P50052 363 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 RIPPLY3P57055 190 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 PMP22Q01453 160 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 SLC7A5Q01650 507 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 POU4F1Q01851 419 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 CDC16Q13042 620 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 CSHL1Q14406 222 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 USP10Q14694 798 aaKnown RBP8.32□□□□□ -1.08
ATG4A-205ENST00000394892 ABRAXAS2Q15018 415 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 TGFBIQ15582 683 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 KBTBD12Q3ZCT8 623 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 SFT2D3Q587I9 215 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 IRAK1BP1Q5VVH5 260 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 C1QL3Q5VWW1 255 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 RPUSD3Q6P087 351 aaKnown RBP8.32□□□□□ -1.08
ATG4A-205ENST00000394892 PAPD4Q6PIY7 484 aaKnown RBP8.32□□□□□ -1.08
ATG4A-205ENST00000394892 C3orf62Q6ZUJ4 267 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 UBE3DQ7Z6J8 389 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.32□□□□□ -1.088e-6■■■■■ 46.4
ATG4A-205ENST00000394892 CA13Q8N1Q1 262 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 ST6GALNAC3Q8NDV1 305 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 NFAM1Q8NET5 270 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-205ENST00000394892 GABPB2Q8TAK5 448 aaPredicted RBP8.32□□□□□ -1.08
ATG4A-205ENST00000394892 ATL1Q8WXF7 558 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 MARVELD3Q96A59 401 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 MS4A3Q96HJ5 214 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 SIGLEC12Q96PQ1 595 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 TRIM54Q9BYV2 358 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 EPS8L2Q9H6S3 715 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 POPDC3Q9HBV1 291 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 GPAMQ9HCL2 828 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 NECTIN3Q9NQS3 549 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 COPG2Q9UBF2 871 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 PTBP2Q9UKA9 531 aaKnown RBP8.32□□□□□ -1.08
ATG4A-205ENST00000394892 ENTPD4Q9Y227 616 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 HEATR5BQ9P2D3 2071 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 DOCK10Q96BY6 2186 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 ESPL1Q14674 2120 aa8.32□□□□□ -1.08
ATG4A-205ENST00000394892 CNTRLQ7Z7A1 2325 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms