RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SLC34A3Q8N130 599 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 KRT78Q8N1N4 520 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 SVOPLQ8N434 492 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ESX1Q8N693 406 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 SPPL2AQ8TCT8 520 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 NUS1Q96E22 293 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 TPD52L3Q96J77 140 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 SPATA9Q9BWV2 254 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ERVK-6Q9BXR3 956 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 DERL2Q9GZP9 239 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ERVK-18Q9QC07 812 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 DNAJB9Q9UBS3 223 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 MALT1Q9UDY8 824 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 CLCA2Q9UQC9 943 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 GSTK1Q9Y2Q3 226 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 TIMM22Q9Y584 194 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 PTPRFP10586 1907 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 TRPM7Q96QT4 1865 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 SMAD6O43541 496 aaKnown RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 UROSP10746 265 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 PIM1P11309 404 aaPredicted RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 S100A3P33764 101 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ADRA1AP35348 466 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 HSF2Q03933 536 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 TGM3Q08188 693 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 GTF2H2Q13888 395 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 GNA13Q14344 377 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 CLCA4Q14CN2 919 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 IGSF11Q5DX21 431 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 SLX4IPQ5VYV7 408 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 GTF2H2CQ6P1K8 395 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 C11orf88Q6PI97 169 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 SPATA19Q7Z5L4 167 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 BTLAQ7Z6A9 289 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ADGRD2Q7Z7M1 963 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 PLCZ1Q86YW0 608 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 NXPE1Q8N323 547 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 TTC29Q8NA56 475 aaPredicted RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 CNIH3Q8TBE1 160 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 EEF1AKMT1Q8WVE0 214 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 TWIST2Q8WVJ9 160 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 AP3S1Q92572 193 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 KCNJ9Q92806 393 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 KIAA1191Q96A73 305 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ISG20Q96AZ6 181 aaKnown RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 ZNF689Q96CS4 500 aaPredicted RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 LRRC58Q96CX6 371 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 SMAD5Q99717 465 aaKnown RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 MYOCQ99972 504 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 KXD1Q9BQD3 176 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 DPCDQ9BVM2 203 aaPredicted RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 ZDHHC4Q9NPG8 344 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ATP13A2Q9NQ11 1180 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 MYO18AQ92614 2054 aaKnown RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 HMX3A6NHT5 357 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ANKDD1BA6NHY2 528 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 AGAP5A6NIR3 686 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 LRRC72A6NJI9 287 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 SLC1A7O00341 560 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 SGTAO43765 313 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ECI2O75521 394 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 SLC22A3O75751 556 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 CPSF4O95639 269 aaKnown RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 IGLV3-27P01718 113 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 APOC3P02656 99 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 CBSLP0DN79 551 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 PRKACGP22612 351 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 HOXD9P28356 352 aaPredicted RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 HOXA9P31269 272 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 CBSP35520 551 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 MAGEA3P43357 314 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 CSNK1DP48730 415 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 CLCN4P51793 760 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ARF5P84085 180 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 LRRC74AQ0VAA2 488 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 NFATC2Q13469 925 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 BCL7AQ4VC05 210 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 FBXO48Q5FWF7 155 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 CAPN13Q6MZZ7 669 aaPredicted RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 Q6ZVL8 140 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 LYSMD2Q8IV50 215 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 CLDN19Q8N6F1 224 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 SORCS1Q8WY21 1168 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 SCRN2Q96FV2 425 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 TMEM181Q9P2C4 612 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 MARCH4Q9P2E8 410 aaPredicted RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 UBQLN2Q9UHD9 624 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 FBXO10Q9UK96 956 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 MRPS17Q9Y2R5 130 aaKnown RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 MAB21L2Q9Y586 359 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 CLCA3PQ9Y6N3 262 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 C5orf58C9J3I9 102 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 FFAR2O15552 330 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 MMP20O60882 483 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 CLDN9O95484 217 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 MT-ND2P03891 347 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 TP53P04637 393 aaPredicted RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 MYOGP15173 224 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ITGA2P17301 1181 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 CD72P21854 359 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms