RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 COX6B1P14854 86 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 CDKN2DP55273 166 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 OR4D2P58180 307 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 RGS1Q08116 209 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 ABHD13Q7L211 337 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 RPS19BP1Q86WX3 136 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 ACTRT1Q8TDG2 376 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 PHF10Q8WUB8 498 aaKnown RBP16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 FBXL8Q96CD0 374 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 LINGO1Q96FE5 620 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 MS4A14Q96JA4 679 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 PHF12Q96QT6 1004 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 OR4K3Q96R72 315 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 KLHL1Q9NR64 748 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 ARL15Q9NXU5 204 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 LRFN1Q9P244 771 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 TINAGQ9UJW2 476 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 PPP2R2CQ9Y2T4 447 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 MEMO1Q9Y316 297 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 PKDREJQ9NTG1 2253 aa16.42■□□□□ 0.22
SNRPA1-202ENST00000394082 PCNX1Q96RV3 2341 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 CELSR1Q9NYQ6 3014 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 PABPN1LA6NDY0 278 aaKnown RBP16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 URADA6NGE7 173 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 NDC80O14777 642 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 OR1F1O43749 312 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 CDC123O75794 336 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 TRHRP34981 398 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 SCTRP47872 440 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 CCZ1BP86790 482 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 CCZ1P86791 482 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 OC90Q02509 493 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 GALNTL5Q7Z4T8 443 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 EID3Q8N140 333 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 GHDCQ8N2G8 530 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 GPATCH11Q8N954 259 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 POGLUT1Q8NBL1 392 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 OR5T3Q8NGG3 340 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 ANKRD7Q92527 254 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 TSLPQ969D9 159 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 TRIM51Q9BSJ1 452 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 HES7Q9BYE0 225 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 TRIM8Q9BZR9 551 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 GPAMQ9HCL2 828 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 ANKRD10Q9NXR5 420 aa16.41■□□□□ 0.22
SNRPA1-202ENST00000394082 GOLGA6L10A0A0M3HER8 536 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 CES2O00748 559 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 CHST10O43529 356 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 NRDCO43847 1150 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 NME2P1O60361 137 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 MAN1A2O60476 641 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 PRMT3O60678 531 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 CLDN14O95500 239 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 POU3F2P20265 443 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 NME2P22392 152 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 CYB561P49447 251 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 SRSF11Q05519 484 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 CSHL1Q14406 222 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 DEFB134Q4QY38 66 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 RBM20Q5T481 1227 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 TRPV3Q8NET8 790 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 SLCO2A1Q92959 643 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 ALKBH8Q96BT7 664 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 PYCR2Q96C36 320 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 MTFMTQ96DP5 389 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 CERS2Q96G23 380 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 LURAP1Q96LR2 239 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 SLC6A16Q9GZN6 736 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 CDCP1Q9H5V8 836 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 SH3BGRL2Q9UJC5 107 aa16.4■□□□□ 0.22
SNRPA1-202ENST00000394082 IGKV3D-11A0A0A0MRZ8 115 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 TCRBV16S1A1N1A0A5B0 115 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 ZNF860A6NHJ4 632 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 SAGE2PA6NJ88 616 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 NPIPA5E9PKD4 350 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 E9PLN8 166 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 FAM227AF5H4B4 570 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 SLC25A12O75746 678 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 SMIM10L1P0DMW3 83 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 SSTR2P30874 369 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 MLF1P58340 268 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 PDAP1Q13442 181 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 TERF2Q15554 542 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 CHERPQ8IWX8 916 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 ACBD4Q8NC06 268 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 UTP15Q8TED0 518 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 SLC5A11Q8WWX8 675 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 NEIL2Q969S2 332 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 SMIM10Q96HG1 83 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 PTCHD1Q96NR3 888 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 VKORC1Q9BQB6 163 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 RBCK1Q9BYM8 510 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 PELI2Q9HAT8 420 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 PRDM9Q9NQV7 894 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 NPIPA1Q9UND3 350 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 VWA7Q9Y334 891 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 AKAP9Q99996 3911 aa16.39■□□□□ 0.21
SNRPA1-202ENST00000394082 DNALI1O14645 258 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-202ENST00000394082 SERPINA6P08185 405 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms