RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 BARD1Q99728 777 aaKnown RBP10.74□□□□□ -0.69
CUX1-204ENST00000393824 COPS4Q9BT78 406 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 IKZF5Q9H5V7 419 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 C3orf14Q9HBI5 128 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 WDR70Q9NW82 654 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 RNF112Q9ULX5 631 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 CFL2Q9Y281 166 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 CRYL1Q9Y2S2 319 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 SUPT3HB4E1H0 165 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 RPP40O75818 363 aaKnown RBP10.74□□□□□ -0.69
CUX1-204ENST00000393824 EPOP01588 193 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 CYP17A1P05093 508 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 RHOCP08134 193 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 MMP2P08253 660 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 G6PDP11413 515 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 TYRP14679 529 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 PRKACAP17612 351 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 MLLT3P42568 568 aaPredicted RBP10.74□□□□□ -0.69
CUX1-204ENST00000393824 FAPQ12884 760 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 CDH18Q13634 790 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 GAB4Q2WGN9 574 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 CARD16Q5EG05 197 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 SIRPB2Q5JXA9 342 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 ATAT1Q5SQI0 421 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 XKRXQ6PP77 449 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 SCIMPQ6UWF3 145 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 ZNF767PQ75MW2 155 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 CEP68Q76N32 757 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 CHST9Q7L1S5 443 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 TCTE3Q8IZS6 198 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 NKAPQ8N5F7 415 aaKnown RBP10.74□□□□□ -0.69
CUX1-204ENST00000393824 BLOC1S5Q8TDH9 187 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 ELMO1Q92556 727 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 LMLNQ96KR4 655 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 CDX2Q99626 313 aaPredicted RBP10.74□□□□□ -0.69
CUX1-204ENST00000393824 UQCC2Q9BRT2 126 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 TRAF4Q9BUZ4 470 aaPredicted RBP10.74□□□□□ -0.69
CUX1-204ENST00000393824 BBS2Q9BXC9 721 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 SPHK2Q9NRA0 654 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 ABCB8Q9NUT2 735 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 PSORS1C1Q9UIG5 152 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 ATPIF1Q9UII2 106 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 DMDP11532 3685 aa10.74□□□□□ -0.69
CUX1-204ENST00000393824 A0A096LPI6 279 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 OR5K3A6NET4 321 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 LAMP2P13473 410 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 HLA-DPA1P20036 260 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 CD9P21926 228 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 C21orf33P30042 268 aaPredicted RBP10.73□□□□□ -0.69
CUX1-204ENST00000393824 TNFSF8P32971 234 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 PTGS2P35354 604 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 CD86P42081 329 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 TAGLNQ01995 201 aaKnown RBP10.73□□□□□ -0.69
CUX1-204ENST00000393824 TNK1Q13470 666 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 RUNDC3AQ59EK9 446 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 ARMC4Q5T2S8 1044 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 PLPP6Q8IY26 295 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 OR8H2Q8N162 312 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 CYP4Z2PQ8N1L4 340 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 TP53I13Q8NBR0 393 aaPredicted RBP10.73□□□□□ -0.69
CUX1-204ENST00000393824 SLC13A3Q8WWT9 602 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 SORCS1Q8WY21 1168 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 DNASE1L2Q92874 299 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 MYDGFQ969H8 173 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 UBE2FQ969M7 185 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 Q96MT0 163 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 OR51E2Q9H255 320 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 RNF167Q9H6Y7 350 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 NT5MQ9NPB1 228 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 RASSF1Q9NS23 344 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 TAS2R13Q9NYV9 303 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 PCTPQ9UKL6 214 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 WDFY4Q6ZS81 3184 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 LOC100506127A0A0U1RQW1 187 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 SMAD6O43541 496 aaKnown RBP10.73□□□□□ -0.69
CUX1-204ENST00000393824 PRAMEF11O60813 436 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 ECI2O75521 394 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 B3GALNT1O75752 331 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 SERPINA1P01009 418 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 ALPPP05187 535 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 FGF1P05230 155 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 ATXN1LP0C7T5 689 aaKnown RBP10.73□□□□□ -0.69
CUX1-204ENST00000393824 EPHA2P29317 976 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 RGS6P49758 472 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 STK19P49842 368 aaPredicted RBP10.73□□□□□ -0.69
CUX1-204ENST00000393824 STC1P52823 247 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 IRF3Q14653 427 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 DHCR24Q15392 516 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 SOWAHCQ53LP3 525 aaPredicted RBP10.73□□□□□ -0.69
CUX1-204ENST00000393824 ATG9BQ674R7 924 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 TIGD3Q6B0B8 471 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 OR2T5Q6IEZ7 315 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 MAMSTRQ6ZN01 415 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 CALHM3Q86XJ0 350 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 ZDHHC21Q8IVQ6 265 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 MSRB3Q8IXL7 192 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 ENTHD1Q8IYW4 607 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 LINC00469Q8N7U9 141 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 OR2T29Q8NH02 315 aa10.73□□□□□ -0.69
CUX1-204ENST00000393824 ZNF675Q8TD23 568 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms