RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 AHCYL2Q96HN2 611 aaKnown RBP19.06■□□□□ 0.64
SHANK1-203ENST00000391813 TRPV4Q9HBA0 871 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 DNAJC27Q9NZQ0 273 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 TLR6Q9Y2C9 796 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 CDH10Q9Y6N8 788 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 MCIDASD6RGH6 385 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 PRH1P02810 166 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 OR10H5Q8NGA6 315 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 SNIP1Q8TAD8 396 aaKnown RBP19.06■□□□□ 0.64
SHANK1-203ENST00000391813 ZCCHC3Q9NUD5 404 aaKnown RBP19.06■□□□□ 0.64
SHANK1-203ENST00000391813 DUXAA6NLW8 204 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 LOC730098B7Z3J9 87 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 ENPP3O14638 875 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 ALPPP05187 535 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 CBSLP0DN79 551 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 CBSP35520 551 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 DNASE1L1P49184 302 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 OLIG2Q13516 323 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 UNC50Q53HI1 259 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 FAM76BQ5HYJ3 339 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 CEP68Q76N32 757 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 NOXA1Q86UR1 476 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 MAPK15Q8TD08 544 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 TSGA13Q96PP4 275 aa19.06■□□□□ 0.64
SHANK1-203ENST00000391813 TRAV6A0A075B6T7 132 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 TACSTD2P09758 323 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 DDX6P26196 483 aaKnown RBP eCLIP19.05■□□□□ 0.64
SHANK1-203ENST00000391813 KCNJ8Q15842 424 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 UGT8Q16880 541 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 KANK2Q63ZY3 851 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 PRSS55Q6UWB4 352 aaPredicted RBP19.05■□□□□ 0.64
SHANK1-203ENST00000391813 SLC36A4Q6YBV0 504 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 TIGD4Q8IY51 512 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 PCBD2Q9H0N5 130 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 DUS2Q9NX74 493 aaKnown RBP19.05■□□□□ 0.64
SHANK1-203ENST00000391813 COPZ2Q9P299 210 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 DCKP27707 260 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 FADDQ13158 208 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 GRM2Q14416 872 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 ZNF598Q86UK7 904 aaKnown RBP19.05■□□□□ 0.64
SHANK1-203ENST00000391813 CIR1Q86X95 450 aaPredicted RBP19.05■□□□□ 0.64
SHANK1-203ENST00000391813 SPERTQ8NA61 448 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 OR8J1Q8NGP2 316 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 RAD9AQ99638 391 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 CUEDC1Q9NWM3 386 aaPredicted RBP19.05■□□□□ 0.64
SHANK1-203ENST00000391813 RABL2AQ9UBK7 228 aaPredicted RBP19.05■□□□□ 0.64
SHANK1-203ENST00000391813 ADAMTS5Q9UNA0 930 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 RABL2BQ9UNT1 228 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 C5orf51A6NDU8 294 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 LRRC14BA6NHZ5 514 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 NOVP48745 357 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 AGAP6Q5VW22 663 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 PHYKPLQ8IUZ5 450 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 AGAP4Q96P64 663 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 SPATA9Q9BWV2 254 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 ABCG5Q9H222 651 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 IFT46Q9NQC8 304 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 SOBPA7XYQ1 873 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 AP1G1O43747 822 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 PRNPP04156 253 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 GGT1P19440 569 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 ANKRD26P1Q6NSI1 321 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 METTL25Q8N6Q8 603 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 CXorf40BQ96DE9 158 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 SAGE1Q9NXZ1 904 aa19.05■□□□□ 0.64
SHANK1-203ENST00000391813 TCRBV3S1A0A5B6 114 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 GNAO1P09471 354 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 NR4A2P43354 598 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 RBBP4Q09028 425 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 PROX2Q3B8N5 592 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 TCEAL5Q5H9L2 206 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 IRAK1BP1Q5VVH5 260 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 DUS1LQ6P1R4 473 aaKnown RBP19.04■□□□□ 0.64
SHANK1-203ENST00000391813 NAPRTQ6XQN6 538 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 ZFAND4Q86XD8 727 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 SPARTQ8N0X7 666 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 NEIL3Q8TAT5 605 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 GON7Q9BXV9 100 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 PPIEQ9UNP9 301 aaKnown RBP19.04■□□□□ 0.64
SHANK1-203ENST00000391813 GRID2O43424 1007 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 ATE1O95260 518 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 C1orf220Q5T0J3 134 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 PRPF38BQ5VTL8 546 aaKnown RBP19.04■□□□□ 0.64
SHANK1-203ENST00000391813 DESI1Q6ICB0 168 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 ULK3Q6PHR2 472 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 MBOAT1Q6ZNC8 495 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 C1orf52Q8N6N3 182 aaKnown RBP19.04■□□□□ 0.64
SHANK1-203ENST00000391813 STOML3Q8TAV4 291 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 WFIKKN2Q8TEU8 576 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 FERD3LQ96RJ6 166 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 SYT11Q9BT88 431 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 TSSK6Q9BXA6 273 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 PPIL3Q9H2H8 161 aaKnown RBP19.04■□□□□ 0.64
SHANK1-203ENST00000391813 AGPAT4Q9NRZ5 378 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 GPN3Q9UHW5 284 aaPredicted RBP19.04■□□□□ 0.64
SHANK1-203ENST00000391813 GLI3P10071 1580 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 SH3D21A4FU49 640 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 G3V2L1 256 aa19.04■□□□□ 0.64
SHANK1-203ENST00000391813 CAPN5O15484 640 aaPredicted RBP19.04■□□□□ 0.64
SHANK1-203ENST00000391813 MLLT6P55198 1093 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms