RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 TRAP1Q12931 704 aaKnown RBP12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 SLC14A2Q15849 920 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 C10orf62Q5T681 223 aaPredicted RBP12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 ZBTB46Q86UZ6 589 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 SLC34A3Q8N130 599 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 L3HYPDHQ96EM0 354 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 KCNC2Q96PR1 638 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 MEAF6Q9HAF1 191 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 DKK3Q9UBP4 350 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 TRBC2A0A5B9 178 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 SNNO75324 88 aaPredicted RBP12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 IFNGP01579 166 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 JAK1P23458 1154 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 ACADVLP49748 655 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 XIAPP98170 497 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 DEFB133Q30KQ1 61 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 FAM180BQ6P0A1 224 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 FIGLAQ6QHK4 219 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 SMARCD3Q6STE5 483 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 CNTN4Q8IWV2 1026 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 OR5M3Q8NGP4 307 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 PIGXQ8TBF5 258 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 MIEF2Q96C03 454 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 GSTO2Q9H4Y5 243 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 DNAJB9Q9UBS3 223 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 ADAMTS6Q9UKP5 1117 aa12.62□□□□□ -0.39
PTPRN2-202ENST00000389416 PRRT4C9JH25 899 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 LINC01565O15544 149 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 HRH2P25021 359 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 PIK3CBP42338 1070 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 TARDBPQ13148 414 aaKnown RBP eCLIP12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 GALNT10Q86SR1 603 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 OR7G3Q8NG95 312 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 FAM53CQ9NYF3 392 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 OR2B3O76000 313 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 TALDO1P37837 337 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 CDK9P50750 372 aaKnown RBP12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 TTC3P53804 2025 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 CTBSQ01459 385 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 RAPSNQ13702 412 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 C6orf89Q6UWU4 347 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 OR4N5Q8IXE1 308 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 Q9N2J8 555 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 NRXN2Q9P2S2 1712 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 OAZ3Q9UMX2 235 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 KIAA1217Q5T5P2 1943 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 UGT2B11O75310 529 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 CREG1O75629 220 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 PRLP01236 227 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 DHRS4L1P0CG22 281 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 HSD3B1P14060 373 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 MAGP20916 626 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 HSD3B2P26439 372 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 CLCN7P51798 805 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 AQP4P55087 323 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 LGALS3BPQ08380 585 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 TYSND1Q2T9J0 566 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 ZNF311Q5JNZ3 666 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 CTSL3PQ5NE16 218 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 THAP5Q7Z6K1 395 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 MTERF3Q96E29 417 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 ZNF570Q96NI8 536 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 THAP10Q9P2Z0 257 aaPredicted RBP12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 NRG3P56975 720 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 CSNK2BP67870 215 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 CRISPLD2Q9H0B8 497 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 DDX28Q9NUL7 540 aaKnown RBP12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 TAS2R9Q9NYW1 312 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 ACTR3BQ9P1U1 418 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 HCN3Q9P1Z3 774 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 EMCNQ9ULC0 261 aa12.61□□□□□ -0.39
PTPRN2-202ENST00000389416 KCNJ13O60928 360 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 AHCYP23526 432 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 NR1H2P55055 460 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 MTTPP55157 894 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 PCDH1Q08174 1060 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 TIMM50Q3ZCQ8 353 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 FAM91A1Q658Y4 838 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 GJD3Q8N144 294 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 NEIL2Q969S2 332 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 GPATCH1Q9BRR8 931 aaKnown RBP12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 GEMIN8Q9NWZ8 242 aaKnown RBP12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 THUMPD1Q9NXG2 353 aaKnown RBP12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 PTGFRNQ9P2B2 879 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 NUAK1O60285 661 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 ANGPTL1O95841 491 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 IGLV3-27P01718 113 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 CCDC159P0C7I6 412 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 AOAHP28039 575 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 CD6P30203 668 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 RPL5P46777 297 aaKnown RBP12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 DUSP3P51452 185 aaPredicted RBP12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 OLR1P78380 273 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 NNATQ16517 81 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.6□□□□□ -0.398e-7■■■■■ 40.6
PTPRN2-202ENST00000389416 TTLL10Q6ZVT0 673 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 SLC29A4Q7RTT9 530 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 KLHDC8AQ8IYD2 350 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 OR8H2Q8N162 312 aa12.6□□□□□ -0.39
PTPRN2-202ENST00000389416 ART5Q96L15 291 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms