RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 LETM1O95202 739 aaPredicted RBP3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 CHRNGP07510 517 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 OR3A2P47893 321 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 NR0B1P51843 470 aaKnown RBP3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 RPP38P78345 283 aaKnown RBP3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 KCNJ10P78508 379 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 SLC34A1Q06495 639 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 PDE7AQ13946 482 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 ACKR1Q16570 336 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 FUT11Q495W5 492 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 RAB12Q6IQ22 244 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 TATDN1Q6P1N9 297 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 PSRC1Q6PGN9 363 aaPredicted RBP3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 Q6ZRP5 223 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 Q6ZSR9 355 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 FCRLAQ7L513 359 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 TRMT11Q7Z4G4 463 aaKnown RBP3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 RABEPKQ7Z6M1 372 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 CUZD1Q86UP6 607 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 HOGA1Q86XE5 327 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 FAM89BQ8N5H3 189 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 OR8H1Q8NGG4 311 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 GATAD1Q8WUU5 269 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 SEPT8Q92599 483 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 GGHQ92820 318 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 DDX50Q9BQ39 737 aaKnown RBP3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 NTMT1Q9BV86 223 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 FAM212BQ9NTI7 297 aaPredicted RBP3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 INTS10Q9NVR2 710 aaKnown RBP3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 ELF5Q9UKW6 265 aaPredicted RBP3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 SATB2Q9UPW6 733 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 EXOC6BQ9Y2D4 811 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 SMCHD1A6NHR9 2005 aa3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 DHX29Q7Z478 1369 aaKnown RBP3.98□□□□□ -1.77
RNU6-549P-201ENST00000384433 A0A087WW49 117 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 GTPBP10A4D1E9 387 aaKnown RBP3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 PSMD3O43242 534 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 CXCL14O95715 111 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 CLDN1O95832 211 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 VTNP04004 478 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 ODC1P11926 461 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 OR1D2P34982 312 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 SLC12A3P55017 1021 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 GFPT1Q06210 699 aaPredicted RBP3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 SRSF9Q13242 221 aaKnown RBP eCLIP3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 GK2Q14410 553 aaPredicted RBP3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 MAPK11Q15759 364 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 PWWP2BQ6NUJ5 590 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 C1orf186Q6ZWK4 172 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 THEM5Q8N1Q8 247 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 RTL3Q8N8U3 475 aaKnown RBP3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 BPIFA2Q96DR5 249 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 GAL3ST4Q96RP7 486 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 NKX3-1Q99801 234 aaPredicted RBP3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 FUCA2Q9BTY2 467 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 NACAP1Q9BZK3 213 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 ZNF696Q9H7X3 374 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 MAGEF1Q9HAY2 307 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 POLKQ9UBT6 870 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 WDR37Q9Y2I8 494 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 ARID2Q68CP9 1835 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 WDR81Q562E7 1941 aa3.97□□□□□ -1.77
RNU6-549P-201ENST00000384433 M0R296 226 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 TLR4O00206 839 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 ZBTB14O43829 449 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 KRT33AO76009 404 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 STBD1O95210 358 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 SP1P08047 785 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 STMN1P16949 149 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 UGT1A6P19224 532 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 OPRL1P41146 370 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 CLCN4P51793 760 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 PAX9P55771 341 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 ITGA9Q13797 1035 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 TEAD2Q15562 447 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 ZNF876PQ49A33 203 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 C9orf50Q5SZB4 431 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 ADAMTSL4-AS1Q5T5F5 129 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 SLC27A4Q6P1M0 643 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 ZNF410Q86VK4 478 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 TEX26Q8N6G2 289 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 NIPA2Q8N8Q9 360 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 OR52E1Q8NGJ3 308 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 OR10G8Q8NGN5 311 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 SMPDL3AQ92484 453 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 ARHGAP45Q92619 1136 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 SLC35C1Q96A29 364 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 ZNF560Q96MR9 790 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 LITAFQ99732 161 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 NYXQ9GZU5 481 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 WWTR1Q9GZV5 400 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 MTIF3Q9H2K0 278 aaKnown RBP3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 MAD2L2Q9UI95 211 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 PILRAQ9UKJ1 303 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 PLCL2Q9UPR0 1127 aa3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 MRPS28Q9Y2Q9 187 aaKnown RBP3.96□□□□□ -1.78
RNU6-549P-201ENST00000384433 TMEM129A0AVI4 362 aa3.95□□□□□ -1.78
RNU6-549P-201ENST00000384433 EME2A4GXA9 379 aaPredicted RBP3.95□□□□□ -1.78
RNU6-549P-201ENST00000384433 PRR23AA6NEV1 266 aa3.95□□□□□ -1.78
RNU6-549P-201ENST00000384433 FAM72CH0Y354 149 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms