RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 DKK3Q9UBP4 350 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 TRPS1Q9UHF7 1281 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 PSORS1C1Q9UIG5 152 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.62□□□□□ -1.03
GPNMB-202ENST00000381990 ABCG2Q9UNQ0 655 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 TRAPPC4Q9Y296 219 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 SLC27A6Q9Y2P4 619 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 SAMHD1Q9Y3Z3 626 aaKnown RBP8.62□□□□□ -1.03
GPNMB-202ENST00000381990 N6AMT1Q9Y5N5 214 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 PRSS21Q9Y6M0 314 aa8.62□□□□□ -1.03
GPNMB-202ENST00000381990 TSPAN11A1L157 253 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 MYO1GB0I1T2 1018 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 M0R082 166 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 DSCR3O14972 297 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 KMOO15229 486 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 SLC25A14O95258 325 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ZNF682O95780 498 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 C1SP09871 688 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 DBTP11182 482 aaKnown RBP8.61□□□□□ -1.03
GPNMB-202ENST00000381990 CYP2A6P11509 494 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-202ENST00000381990 SPNP16150 400 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ZNF30P17039 623 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 HOXB9P17482 250 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-202ENST00000381990 DGKAP23743 735 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 GADD45AP24522 165 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 TGFBR1P36897 503 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 DDOSTP39656 456 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 VIPR2P41587 438 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 SPINT3P49223 89 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 UGT2B15P54855 530 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ITGA1P56199 1179 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 OR2B6P58173 313 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 RPP38P78345 283 aaKnown RBP8.61□□□□□ -1.03
GPNMB-202ENST00000381990 CHRNEQ04844 493 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ARHGEF7Q14155 803 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 EIF4HQ15056 248 aaKnown RBP8.61□□□□□ -1.03
GPNMB-202ENST00000381990 CDK10Q15131 360 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 CARTPTQ16568 116 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 SYT16Q17RD7 645 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 USP39Q53GS9 565 aaKnown RBP8.61□□□□□ -1.03
GPNMB-202ENST00000381990 SBSNQ6UWP8 590 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 NPAS3Q8IXF0 933 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 UBQLNLQ8IYU4 475 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ENTHD1Q8IYW4 607 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ZBTB2Q8N680 514 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 Q8N9G6 341 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-202ENST00000381990 GRPEL2Q8TAA5 225 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 LKAAEAR1Q8TD35 194 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 APH1BQ8WW43 257 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 TRIM63Q969Q1 353 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 TESCQ96BS2 214 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ULK4Q96C45 1275 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 LRIG1Q96JA1 1093 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 RHNO1Q9BSD3 238 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 LMAN2LQ9H0V9 348 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 SERHLQ9NQF3 203 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 FKBP14Q9NWM8 211 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 YBX2Q9Y2T7 364 aaKnown RBP8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ATG2AQ2TAZ0 1938 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 PLXNB3Q9ULL4 1909 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 CLCA1A8K7I4 914 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 CENPXA8MT69 81 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 LEFTY1O75610 366 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 C9P02748 559 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 CDK1P06493 297 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 EBLN1P0CF75 366 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 PRPS2P11908 318 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ITGB6P18564 788 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 CXCR2P25025 360 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 GTF2E2P29084 291 aaKnown RBP8.61□□□□□ -1.03
GPNMB-202ENST00000381990 VIPR1P32241 457 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 S100A3P33764 101 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 SLC15A1P46059 708 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 PRIM2P49643 509 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 CLDN8P56748 225 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 SHHQ15465 462 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ZFP69Q49AA0 526 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ATP13A5Q4VNC0 1218 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ARSIQ5FYB1 569 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 TCEAL5Q5H9L2 206 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 FAM78AQ5JUQ0 283 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ATAD3CQ5T2N8 411 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 GPRC6AQ5T6X5 926 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 CCDC190Q86UF4 302 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 CCDC71Q8IV32 467 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ST13P5Q8NFI4 369 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-202ENST00000381990 NUDT8Q8WV74 236 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 SMARCD2Q92925 531 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 CRELD1Q96HD1 420 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 ASB16Q96NS5 453 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 COPS8Q99627 209 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 EPYCQ99645 322 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 BARD1Q99728 777 aaKnown RBP8.61□□□□□ -1.03
GPNMB-202ENST00000381990 NTMT1Q9BV86 223 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 SLC29A3Q9BZD2 475 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 CERS4Q9HA82 394 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 LATS2Q9NRM7 1088 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 AASDHPPTQ9NRN7 309 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 RASSF1Q9NS23 344 aa8.61□□□□□ -1.03
GPNMB-202ENST00000381990 SPASTQ9UBP0 616 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms