RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 INPPL1O15357 1258 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 AGR2O95994 175 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 HLA-DQB2P05538 268 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 ADH5P11766 374 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 MLLT6P55198 1093 aaPredicted RBP13.54□□□□□ -0.24
SNPH-201ENST00000381867 CDK6Q00534 326 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 RING1Q06587 406 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 GFOD2Q3B7J2 385 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 GXYLT1Q4G148 440 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 ZNF227Q86WZ6 799 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 HDDC3Q8N4P3 179 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 OR2L8Q8NGY9 312 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 CLEC4CQ8WTT0 213 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 TMEM74Q96NL1 305 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 BIRC8Q96P09 236 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 CD93Q9NPY3 652 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 MOCS1Q9NZB8 636 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 UBQLN2Q9UHD9 624 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 UBXN7O94888 489 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 F8A1P23610 371 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 CDH11P55287 796 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 FRG2Q64ET8 278 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 MARVELD2Q8N4S9 558 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 TTLQ8NG68 377 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 ZNF285Q96NJ3 590 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 FRG2BQ96QU4 278 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 BTBD1Q9H0C5 482 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 ZNF700Q9H0M5 742 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 FAM170BA6NMN3 283 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 A8MV72 311 aaPredicted RBP13.54□□□□□ -0.24
SNPH-201ENST00000381867 SAP18O00422 153 aaKnown RBP13.54□□□□□ -0.24
SNPH-201ENST00000381867 DLDP09622 509 aaKnown RBP13.54□□□□□ -0.24
SNPH-201ENST00000381867 CHRM1P11229 460 aaPredicted RBP13.54□□□□□ -0.24
SNPH-201ENST00000381867 PRKCHP24723 683 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 AFF1P51825 1210 aaKnown RBP13.54□□□□□ -0.24
SNPH-201ENST00000381867 S100A10P60903 97 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 RABL3Q5HYI8 236 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 SLC15A3Q8IY34 581 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 PNLDC1Q8NA58 520 aaKnown RBP13.54□□□□□ -0.24
SNPH-201ENST00000381867 FAM46DQ8NEK8 389 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 OR5J2Q8NH18 312 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 ASB12Q8WXK4 309 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 C1orf74Q96LT6 269 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 NPY6RQ99463 290 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 SMOQ99835 787 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 TIGARQ9NQ88 270 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 ABI3Q9P2A4 366 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 PVALBP20472 110 aaPredicted RBP13.54□□□□□ -0.24
SNPH-201ENST00000381867 TAS2R43P59537 309 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 PAFAH1B3Q15102 231 aaKnown RBP13.54□□□□□ -0.24
SNPH-201ENST00000381867 ATP6AP1Q15904 470 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 CTC1Q2NKJ3 1217 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 C2orf27AQ580R0 203 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 TMEM53Q6P2H8 277 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 ZNF367Q7RTV3 350 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 DGLUCYQ7Z3D6 616 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 KLK6Q92876 244 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 GAL3ST4Q96RP7 486 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 TRMT61BQ9BVS5 477 aaKnown RBP13.54□□□□□ -0.24
SNPH-201ENST00000381867 TDP1Q9NUW8 608 aa13.54□□□□□ -0.24
SNPH-201ENST00000381867 KLHL33A6NCF5 533 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 AXIN1O15169 862 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 BCHEP06276 602 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 VAMP1P23763 118 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 HSD17B2P37059 387 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 SLBPQ14493 270 aaKnown RBP eCLIP13.53□□□□□ -0.24
SNPH-201ENST00000381867 FAM189A2Q15884 450 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 BRAT1Q6PJG6 821 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 PROKR2Q8NFJ6 384 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 OR5AK3PQ8NH89 298 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 NFKBIDQ8NI38 313 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 RAB11FIP5Q9BXF6 653 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 HEBP2Q9Y5Z4 205 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 FBP2O00757 339 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 TLX2O43763 284 aaPredicted RBP13.53□□□□□ -0.24
SNPH-201ENST00000381867 CSF2P04141 144 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 TFPTP0C1Z6 253 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 PABPC4LP0CB38 370 aaKnown RBP13.53□□□□□ -0.24
SNPH-201ENST00000381867 CSNK2A2P19784 350 aaPredicted RBP13.53□□□□□ -0.24
SNPH-201ENST00000381867 PRKACGP22612 351 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 DSG2Q14126 1118 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 SEC23BQ15437 767 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 MSS51Q4VC12 460 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 ALPK1Q96QP1 1244 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 XYLT2Q9H1B5 865 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 FAM120CQ9NX05 1096 aaKnown RBP13.53□□□□□ -0.24
SNPH-201ENST00000381867 TAS2R10Q9NYW0 307 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 EXOSC1Q9Y3B2 195 aaKnown RBP13.53□□□□□ -0.24
SNPH-201ENST00000381867 LRRN3E7EW58 273 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 ELK4P28324 431 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 BLKP51451 505 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 HNRNPA0Q13151 305 aaKnown RBP13.53□□□□□ -0.24
SNPH-201ENST00000381867 SLC36A4Q6YBV0 504 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 JSRP1Q96MG2 331 aaPredicted RBP13.53□□□□□ -0.24
SNPH-201ENST00000381867 HIST1H2AAQ96QV6 131 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 CCDC106Q9BWC9 280 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 STRA6Q9BX79 667 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 LRRN3Q9H3W5 708 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 ABCB8Q9NUT2 735 aa13.53□□□□□ -0.24
SNPH-201ENST00000381867 GALPQ9UBC7 116 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms