RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ANKRD26P1Q6NSI1 321 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 PIWIL3Q7Z3Z3 882 aaKnown RBP22.15■■□□□ 1.14
VPS16-201ENST00000380443 SLC9B2Q86UD5 537 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 GALNT15Q8N3T1 639 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 NRBF2Q96F24 287 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 MENTQ9BUN1 341 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 SLC17A9Q9BYT1 436 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 PREBQ9HCU5 417 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 VCX3AQ9NNX9 186 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 SERGEFQ9UGK8 458 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 C3orf18Q9UK00 162 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 BAG5Q9UL15 447 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 SLC17A4Q9Y2C5 497 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 PRUNE2Q8WUY3 3088 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 SH3BGRLO75368 114 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 PAK4O96013 591 aaPredicted RBP22.15■■□□□ 1.14
VPS16-201ENST00000380443 SEMG1P04279 462 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 DCTP40126 519 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 CLCNKAP51800 687 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 FADDQ13158 208 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 SHQ1Q6PI26 577 aaKnown RBP22.15■■□□□ 1.14
VPS16-201ENST00000380443 RBM44Q6ZP01 1051 aaKnown RBP22.15■■□□□ 1.14
VPS16-201ENST00000380443 C11orf65Q8NCR3 313 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 ZNF555Q8NEP9 628 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 WDR48Q8TAF3 677 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 FBXL20Q96IG2 436 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 GABARAPL1Q9H0R8 117 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 RBM38Q9H0Z9 239 aaKnown RBP22.15■■□□□ 1.14
VPS16-201ENST00000380443 SPNS1Q9H2V7 528 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 UBE2ZQ9H832 354 aaPredicted RBP22.15■■□□□ 1.14
VPS16-201ENST00000380443 PAPOLBQ9NRJ5 636 aaKnown RBP22.15■■□□□ 1.14
VPS16-201ENST00000380443 ICKQ9UPZ9 632 aa22.15■■□□□ 1.14
VPS16-201ENST00000380443 E2F6O75461 281 aa22.14■■□□□ 1.13
VPS16-201ENST00000380443 ZNF682O95780 498 aa22.14■■□□□ 1.13
VPS16-201ENST00000380443 HOXC4P09017 264 aaPredicted RBP22.14■■□□□ 1.13
VPS16-201ENST00000380443 RPS6KA3P51812 740 aa22.14■■□□□ 1.13
VPS16-201ENST00000380443 RAD23AP54725 363 aa22.14■■□□□ 1.13
VPS16-201ENST00000380443 LRRC23Q53EV4 343 aaPredicted RBP22.14■■□□□ 1.13
VPS16-201ENST00000380443 VN1R5Q7Z5H4 357 aa22.14■■□□□ 1.13
VPS16-201ENST00000380443 GANCQ8TET4 914 aa22.14■■□□□ 1.13
VPS16-201ENST00000380443 CLEC1BQ9P126 229 aa22.14■■□□□ 1.13
VPS16-201ENST00000380443 SPASTQ9UBP0 616 aa22.14■■□□□ 1.13
VPS16-201ENST00000380443 TAC3Q9UHF0 121 aa22.14■■□□□ 1.13
VPS16-201ENST00000380443 PLAGL1Q9UM63 463 aa22.14■■□□□ 1.13
VPS16-201ENST00000380443 ORC6Q9Y5N6 252 aa22.14■■□□□ 1.13
VPS16-201ENST00000380443 MYOCOSA0A1B0GUC4 107 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 KDM1AO60341 852 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 KLK1P06870 262 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 TAS2R50P59544 299 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 ESRRGP62508 458 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 FGL2Q14314 439 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 KHDRBS2Q5VWX1 349 aaKnown RBP22.13■■□□□ 1.13
VPS16-201ENST00000380443 SLC30A9Q6PML9 568 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 HORMAD1Q86X24 394 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 OR52N2Q8NGI0 321 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 ZNF764Q96H86 408 aaPredicted RBP22.13■■□□□ 1.13
VPS16-201ENST00000380443 MS4A8Q9BY19 250 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 MVB12BQ9H7P6 319 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 TM7SF3Q9NS93 570 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 ADPRHL2Q9NX46 363 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 OR1A2Q9Y585 309 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 A0A1W2PQU0 124 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 RNGTTO60942 597 aaKnown RBP22.13■■□□□ 1.13
VPS16-201ENST00000380443 KRT75O95678 551 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 FABP3P05413 133 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 MEF2AQ02078 507 aaPredicted RBP22.13■■□□□ 1.13
VPS16-201ENST00000380443 IL18R1Q13478 541 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 ZNF385BQ569K4 471 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 OR2T5Q6IEZ7 315 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 SLC30A8Q8IWU4 369 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 TTLQ8NG68 377 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 OR2T29Q8NH02 315 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 OR14C36Q8NHC7 312 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 ERLEC1Q96DZ1 483 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 FERD3LQ96RJ6 166 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 RPP25Q9BUL9 199 aaKnown RBP22.13■■□□□ 1.13
VPS16-201ENST00000380443 DDX18Q9NVP1 670 aaKnown RBP22.13■■□□□ 1.13
VPS16-201ENST00000380443 TAS2R9Q9NYW1 312 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 PTTG2Q9NZH5 202 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 ADAM29Q9UKF5 820 aa22.13■■□□□ 1.13
VPS16-201ENST00000380443 FAF1Q9UNN5 650 aaPredicted RBP22.13■■□□□ 1.13
VPS16-201ENST00000380443 PRR19A6NJB7 356 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 VILLO15195 856 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 GSTM2P28161 218 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 TTKP33981 857 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 SOX9P48436 509 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 SEC13P55735 322 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 SPIDRQ14159 915 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 TRIM40Q6P9F5 258 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 SPESP1Q6UW49 350 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 ISLR2Q6UXK2 745 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 CHST15Q7LFX5 561 aaPredicted RBP22.12■■□□□ 1.13
VPS16-201ENST00000380443 THAP5Q7Z6K1 395 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 ZNF740Q8NDX6 193 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 SCARF2Q96GP6 870 aaPredicted RBP22.12■■□□□ 1.13
VPS16-201ENST00000380443 C12orf66Q96MD2 445 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 BTBD1Q9H0C5 482 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 TOR3AQ9H497 397 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 TMEM38AQ9H6F2 299 aa22.12■■□□□ 1.13
VPS16-201ENST00000380443 FAM118AQ9NWS6 357 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms