RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 SLAMF8Q9P0V8 285 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 PCDHB3Q9Y5E6 796 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 A0A096LPI6 279 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 A8MUA0 341 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 ADRB3P13945 408 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 CD9P21926 228 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 NDUFS1P28331 727 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 BLKP51451 505 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 XKP51811 444 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 TIGD6Q17RP2 521 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 CATSPEREQ5SY80 951 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 KIAA1161Q6NSJ0 714 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 FAM92BQ6ZTR7 304 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 RNF175Q8N4F7 328 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 MRPL43Q8N983 215 aaKnown RBP12.72□□□□□ -0.37
NPHP4-203ENST00000378169 SHKBP1Q8TBC3 707 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 TBX5Q99593 518 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 RBCK1Q9BYM8 510 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 SMOXQ9NWM0 555 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 IKZF2Q9UKS7 526 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 SNX7Q9UNH6 387 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 HCFC2Q9Y5Z7 792 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 MROH6A6NGR9 719 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 J3QRK9 145 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 KLF8O95600 359 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-203ENST00000378169 IFNGP01579 166 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 FESP07332 822 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 ALDOCP09972 364 aaKnown RBP12.72□□□□□ -0.37
NPHP4-203ENST00000378169 TFPIP10646 304 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 CEBPBP17676 345 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 GPX3P22352 226 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 ZNF311Q5JNZ3 666 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 FAM26DQ5JW98 314 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 C11orf88Q6PI97 169 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 ATG14Q6ZNE5 492 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 HTR3DQ70Z44 454 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 MAVSQ7Z434 540 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 DTWD1Q8N5C7 304 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 FBXL8Q96CD0 374 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 ALPK1Q96QP1 1244 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 WDR12Q9GZL7 423 aaKnown RBP12.72□□□□□ -0.37
NPHP4-203ENST00000378169 ANKHQ9HCJ1 492 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 NEUROD4Q9HD90 331 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 LHX3Q9UBR4 397 aa12.72□□□□□ -0.37
NPHP4-203ENST00000378169 EFCAB9A8MZ26 197 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 CLDN25C9JDP6 229 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 I6L893 689 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-203ENST00000378169 CAPN5O15484 640 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-203ENST00000378169 ASGR2P07307 311 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 SUZ12Q15022 739 aaKnown RBP12.71□□□□□ -0.37
NPHP4-203ENST00000378169 ATG9BQ674R7 924 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 FAM131AQ6UXB0 335 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 RANBP3LQ86VV4 465 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-203ENST00000378169 WFDC5Q8TCV5 224 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 DPH7Q9BTV6 452 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 STOX2Q9P2F5 926 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-203ENST00000378169 DUXAA6NLW8 204 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 B4GALT3O60512 393 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 B4GALT2O60909 372 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 ETFAP13804 333 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 ARNTP27540 789 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 ERVFC1P60507 584 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 ZNF630Q2M218 657 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-203ENST00000378169 CTC1Q2NKJ3 1217 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 RNASE12Q5GAN4 147 aaKnown RBP12.71□□□□□ -0.37
NPHP4-203ENST00000378169 OGFRL1Q5TC84 451 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-203ENST00000378169 FAAH2Q6GMR7 532 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 ARMCX6Q7L4S7 300 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 FAM220AQ7Z4H9 259 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 SAMD14Q8IZD0 417 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-203ENST00000378169 UBE2J2Q8N2K1 259 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 ZNF433Q8N7K0 673 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-203ENST00000378169 OR7G3Q8NG95 312 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 CNIH3Q8TBE1 160 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 C12orf43Q96C57 262 aaKnown RBP12.71□□□□□ -0.37
NPHP4-203ENST00000378169 INPP5KQ9BT40 448 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 GMPR2Q9P2T1 348 aaKnown RBP12.71□□□□□ -0.37
NPHP4-203ENST00000378169 PCDHB14Q9Y5E9 798 aa12.71□□□□□ -0.37
NPHP4-203ENST00000378169 HAT1O14929 419 aa12.71□□□□□ -0.38
NPHP4-203ENST00000378169 HSD17B1P14061 328 aa12.71□□□□□ -0.38
NPHP4-203ENST00000378169 RPS6KA3P51812 740 aa12.71□□□□□ -0.38
NPHP4-203ENST00000378169 PON2Q15165 354 aa12.71□□□□□ -0.38
NPHP4-203ENST00000378169 TAB1Q15750 504 aa12.71□□□□□ -0.38
NPHP4-203ENST00000378169 ATP6AP1Q15904 470 aa12.71□□□□□ -0.38
NPHP4-203ENST00000378169 KRT74Q7RTS7 529 aa12.71□□□□□ -0.38
NPHP4-203ENST00000378169 ZNF248Q8NDW4 579 aa12.71□□□□□ -0.38
NPHP4-203ENST00000378169 ZNF689Q96CS4 500 aaPredicted RBP12.71□□□□□ -0.38
NPHP4-203ENST00000378169 DIRAS2Q96HU8 199 aa12.71□□□□□ -0.38
NPHP4-203ENST00000378169 SFXN1Q9H9B4 322 aa12.71□□□□□ -0.38
NPHP4-203ENST00000378169 GIN1Q9NXP7 522 aa12.71□□□□□ -0.38
NPHP4-203ENST00000378169 GRXCR1A8MXD5 290 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 MCIDASD6RGH6 385 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 SRPRAP08240 638 aaKnown RBP12.7□□□□□ -0.38
NPHP4-203ENST00000378169 LINGO3P0C6S8 592 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 MYL9P24844 172 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 OXTRP30559 389 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 LGALS3BPQ08380 585 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 CST6Q15828 149 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 DEFB134Q4QY38 66 aa12.7□□□□□ -0.38
NPHP4-203ENST00000378169 CTSL3PQ5NE16 218 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms