RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 F2RL3Q96RI0 385 aa16.42■□□□□ 0.22
HLA-DMA-201ENST00000374843 REXO4Q9GZR2 422 aaKnown RBP16.42■□□□□ 0.22
HLA-DMA-201ENST00000374843 ZMYND15Q9H091 742 aa16.42■□□□□ 0.22
HLA-DMA-201ENST00000374843 ACTL8Q9H568 366 aa16.42■□□□□ 0.22
HLA-DMA-201ENST00000374843 PDE7BQ9NP56 450 aa16.42■□□□□ 0.22
HLA-DMA-201ENST00000374843 LHX9Q9NQ69 397 aa16.42■□□□□ 0.22
HLA-DMA-201ENST00000374843 MCM8Q9UJA3 840 aa16.42■□□□□ 0.22
HLA-DMA-201ENST00000374843 G3BP2Q9UN86 482 aaKnown RBP16.42■□□□□ 0.22
HLA-DMA-201ENST00000374843 ADAMTS20P59510 1910 aa16.42■□□□□ 0.22
HLA-DMA-201ENST00000374843 LOC105369274A0A096LPK9 316 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 LOC102723532A0A0G2JNH3 316 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 D6RAR5 112 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 PSMD12O00232 456 aaPredicted RBP16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 ZSCAN9O15535 394 aaPredicted RBP16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 SH3BP5O60239 455 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 PCDH7O60245 1069 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 SRPX2O60687 465 aaPredicted RBP16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 RASSF9O75901 435 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 MYO1DO94832 1006 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 BSGP35613 385 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 RAP1GDS1P52306 607 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 HSD11B2P80365 405 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 PRTGQ2VWP7 1150 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 AASDHQ4L235 1098 aaPredicted RBP16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 TOR1AIP1Q5JTV8 583 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 ABHD17CQ6PCB6 329 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 ZNF574Q6ZN55 896 aaPredicted RBP16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 USP53Q70EK8 1073 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 PAGE2Q7Z2X7 111 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 TMPRSS9Q7Z410 1059 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 YTHDF3Q7Z739 585 aaKnown RBP16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 NUDT13Q86X67 352 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 MCATQ8IVS2 390 aaKnown RBP16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 OR4N4Q8N0Y3 316 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 D2HGDHQ8N465 521 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 LIX1Q8N485 282 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 ARHGEF39Q8N4T4 335 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 ZNF655Q8N720 491 aaPredicted RBP16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 CSNK1A1LQ8N752 337 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 SRFBP1Q8NEF9 429 aaKnown RBP16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 WDR48Q8TAF3 677 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 RGMAQ96B86 450 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 QRFPRQ96P65 431 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 DDX31Q9H8H2 851 aaKnown RBP16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 PLCL2Q9UPR0 1127 aa16.41■□□□□ 0.22
HLA-DMA-201ENST00000374843 ASXL3Q9C0F0 2248 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 C4orf51C9J302 202 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 CASC3O15234 703 aaKnown RBP16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 HCRTR1O43613 425 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 PRMT3O60678 531 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 SH3BGRLO75368 114 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 SERPIND1P05546 499 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 SMIM10L1P0DMW3 83 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 NELFEP18615 380 aaKnown RBP16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 GSTM5P46439 218 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 TGM3Q08188 693 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 BNIP1Q12981 228 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 ILKQ13418 452 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 RCAN2Q14206 197 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 PTGR1Q14914 329 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 TMEM214Q6NUQ4 689 aaKnown RBP16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 ARHGAP22Q7Z5H3 698 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 SLITRK4Q8IW52 837 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 SMIM10Q96HG1 83 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 TMEM74Q96NL1 305 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 KCNC2Q96PR1 638 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 CDC6Q99741 560 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 TBCDQ9BTW9 1192 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 KLHL31Q9H511 634 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 ARL8BQ9NVJ2 186 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 SOHLH2Q9NX45 425 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 ATXN7L1Q9ULK2 861 aaPredicted RBP16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 RP1P56715 2156 aa16.4■□□□□ 0.22
HLA-DMA-201ENST00000374843 COL27A1Q8IZC6 1860 aaPredicted RBP16.39■□□□□ 0.22
HLA-DMA-201ENST00000374843 A0A0A6YYD5 115 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 IGHV5-10-1A0A0J9YXX1 117 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 C4orf47A7E2U8 309 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 SAP18O00422 153 aaKnown RBP16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 TXNDC9O14530 226 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 MAP3K7O43318 606 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 ERI3O43414 337 aaKnown RBP16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 KLHL18O94889 574 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 STATHP02808 62 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 TACR1P25103 407 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 TPP2P29144 1249 aaPredicted RBP16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 ASMTP46597 345 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 ZFP36L2P47974 494 aaKnown RBP16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 CLDN8P56748 225 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 ZNF763Q0D2J5 394 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 RPS6KA2Q15349 733 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 MAPRE2Q15555 327 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 DEFB110Q30KQ9 67 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 TRIM40Q6P9F5 258 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 PAOXQ6QHF9 649 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 PIP4P1Q86T03 277 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 FUNDC1Q8IVP5 155 aa16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 ZCCHC7Q8N3Z6 543 aaKnown RBP16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 GLB1L3Q8NCI6 653 aaPredicted RBP16.39■□□□□ 0.21
HLA-DMA-201ENST00000374843 OR9I1Q8NGQ6 314 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms