RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 CLEC3AO75596 197 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 RSL1D1O76021 490 aaKnown RBP16.72■□□□□ 0.27
PFDN6-201ENST00000374606 HMGCS1Q01581 520 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 SPIDRQ14159 915 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 ZC3H12BQ5HYM0 836 aaKnown RBP16.72■□□□□ 0.27
PFDN6-201ENST00000374606 PCSK4Q6UW60 755 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 VN1R5Q7Z5H4 357 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 KMT5CQ86Y97 462 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 CACNA2D3Q8IZS8 1091 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 TRPV3Q8NET8 790 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 OR4D9Q8NGE8 314 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 ACTRT2Q8TDY3 377 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 RERGQ96A58 199 aaPredicted RBP16.72■□□□□ 0.27
PFDN6-201ENST00000374606 PPP3R2Q96LZ3 170 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 OR52B2Q96RD2 323 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 SERPINI1Q99574 410 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 CCDC28BQ9BUN5 200 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 PDE7BQ9NP56 450 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 PILRAQ9UKJ1 303 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 PPT2Q9UMR5 302 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 SLC12A4Q9UP95 1085 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 CLCA2Q9UQC9 943 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 AP1M2Q9Y6Q5 423 aa16.72■□□□□ 0.27
PFDN6-201ENST00000374606 NTN3O00634 580 aaPredicted RBP16.71■□□□□ 0.27
PFDN6-201ENST00000374606 NDUFS4O43181 175 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 SERPIND1P05546 499 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 SLC35G6P0C7Q6 338 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 THRAP10827 490 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 SEPHS1P49903 392 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 GABPB1Q06547 395 aaPredicted RBP16.71■□□□□ 0.27
PFDN6-201ENST00000374606 DEFB110Q30KQ9 67 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 GALNTL6Q49A17 601 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 ATP6AP1LQ52LC2 224 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 Q6ZSR9 355 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 ASPGQ86U10 573 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 ANKS4BQ8N8V4 417 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 CEP70Q8NHQ1 597 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 FCRL4Q96PJ5 515 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 OR2A5Q96R48 311 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 MS4A8Q9BY19 250 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 ZNF768Q9H5H4 540 aaKnown RBP16.71■□□□□ 0.27
PFDN6-201ENST00000374606 AKTIPQ9H8T0 292 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 FAM60AQ9NP50 221 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 NMRK1Q9NWW6 199 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 SEMA5BQ9P283 1151 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 VPS29Q9UBQ0 182 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 CCL27Q9Y4X3 112 aa16.71■□□□□ 0.27
PFDN6-201ENST00000374606 MYO18BQ8IUG5 2567 aa16.71■□□□□ 0.26
PFDN6-201ENST00000374606 MGAQ8IWI9 3026 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 A8MU76 341 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 E9PBE3 544 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 LSM1O15116 133 aaKnown RBP16.7■□□□□ 0.26
PFDN6-201ENST00000374606 KLHL41O60662 606 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 PEX11AO75192 247 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 TGFB1P01137 390 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 ANKRD34CP0C6C1 535 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 LBPP18428 481 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 HSD11B2P80365 405 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 RHDQ02161 417 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 RGS1Q08116 209 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 LSM12Q3MHD2 195 aaKnown RBP16.7■□□□□ 0.26
PFDN6-201ENST00000374606 SPDYAQ5MJ70 313 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 TMTC4Q5T4D3 741 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 FBXO42Q6P3S6 717 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 TMPRSS9Q7Z410 1059 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 VN1R4Q7Z5H5 301 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 ZNF655Q8N720 491 aaPredicted RBP16.7■□□□□ 0.26
PFDN6-201ENST00000374606 CMTM7Q96FZ5 175 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 WBP1Q96G27 269 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 SLC41A2Q96JW4 573 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 CCDC74BQ96LY2 380 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 CENPKQ9BS16 269 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 CHRNA10Q9GZZ6 450 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 SYNPO2LQ9H987 977 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 LRTM1Q9HBL6 345 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 PDP2Q9P2J9 529 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 GIMAP2Q9UG22 337 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 TRIM33Q9UPN9 1127 aa16.7■□□□□ 0.26
PFDN6-201ENST00000374606 MDC1Q14676 2089 aaKnown RBP16.69■□□□□ 0.26
PFDN6-201ENST00000374606 IGHV5-10-1A0A0J9YXX1 117 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 NPIPB8E9PQR5 432 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 SH3BGRLO75368 114 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 ETHE1O95571 254 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 STATHP02808 62 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 SERPINA6P08185 405 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 PRR35P0CG20 571 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 PRPH2P23942 346 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 PTX3P26022 381 aaPredicted RBP16.69■□□□□ 0.26
PFDN6-201ENST00000374606 RPL38P63173 70 aaKnown RBP16.69■□□□□ 0.26
PFDN6-201ENST00000374606 TUBB3Q13509 450 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 KHDRBS2Q5VWX1 349 aaKnown RBP16.69■□□□□ 0.26
PFDN6-201ENST00000374606 FRMPD2BQ6IN97 320 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 ZNF574Q6ZN55 896 aaPredicted RBP16.69■□□□□ 0.26
PFDN6-201ENST00000374606 CHSY3Q70JA7 882 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 LARP4Q71RC2 724 aaKnown RBP eCLIP16.69■□□□□ 0.268e-7■■■□□ 15.2
PFDN6-201ENST00000374606 ZFAND4Q86XD8 727 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 DNAJC22Q8N4W6 341 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 FNDC5Q8NAU1 212 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 ZNF248Q8NDW4 579 aa16.69■□□□□ 0.26
PFDN6-201ENST00000374606 NT5CQ8TCD5 201 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms