RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 OR2A1Q8NGT9 310 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 OR2L8Q8NGY9 312 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 OR1E3Q8WZA6 343 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 CIDECQ96AQ7 238 aaPredicted RBP18.75■□□□□ 0.59
HDAC1-201ENST00000373548 F2RL3Q96RI0 385 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 CHST8Q9H2A9 424 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 MVB12BQ9H7P6 319 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 SCHIP1Q9P0W5 487 aaPredicted RBP18.75■□□□□ 0.59
HDAC1-201ENST00000373548 DNAJB9Q9UBS3 223 aa18.75■□□□□ 0.59
HDAC1-201ENST00000373548 SNRNP200O75643 2136 aaKnown RBP18.75■□□□□ 0.59
HDAC1-201ENST00000373548 IGKV1-8A0A0C4DH67 115 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 SHISA7A6NL88 538 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 H0Y8X5 98 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 ABCB1P08183 1280 aaPredicted RBP18.74■□□□□ 0.59
HDAC1-201ENST00000373548 IL3P08700 152 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 HBA1P69905 142 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 PRDX1Q06830 199 aaKnown RBP18.74■□□□□ 0.59
HDAC1-201ENST00000373548 C16orf72Q14CZ0 275 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 RPE65Q16518 533 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 TMEM31Q5JXX7 168 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 TPRG1LQ5T0D9 272 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 PGBD3Q8N328 593 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 OR10Q1Q8NGQ4 319 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 GOT1L1Q8NHS2 421 aaPredicted RBP18.74■□□□□ 0.59
HDAC1-201ENST00000373548 MAGEE2Q8TD90 523 aaPredicted RBP18.74■□□□□ 0.59
HDAC1-201ENST00000373548 PDXPQ96GD0 296 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 PYURFQ96I23 114 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 RAB11FIP5Q9BXF6 653 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 PITHD1Q9GZP4 211 aaPredicted RBP18.74■□□□□ 0.59
HDAC1-201ENST00000373548 SMPD3Q9NY59 655 aaPredicted RBP18.74■□□□□ 0.59
HDAC1-201ENST00000373548 AHSPQ9NZD4 102 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 SPASTQ9UBP0 616 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 ICKQ9UPZ9 632 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 RTCAO00442 366 aaKnown RBP18.74■□□□□ 0.59
HDAC1-201ENST00000373548 C6orf47O95873 294 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 CST1P01037 141 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 GNAO1P09471 354 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 PPIBP23284 216 aaKnown RBP18.74■□□□□ 0.59
HDAC1-201ENST00000373548 BSGP35613 385 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 TPMTP51580 245 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 EOGTQ5NDL2 527 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 IKBIPQ70UQ0 350 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 TRIM69Q86WT6 500 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 MMP21Q8N119 569 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 SYNPOQ8N3V7 929 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 DENND6BQ8NEG7 585 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 POP5Q969H6 163 aaKnown RBP18.74■□□□□ 0.59
HDAC1-201ENST00000373548 MTERF3Q96E29 417 aa18.74■□□□□ 0.59
HDAC1-201ENST00000373548 MYCBPQ99417 103 aaPredicted RBP18.74■□□□□ 0.59
HDAC1-201ENST00000373548 ZNF282Q9UDV7 671 aaPredicted RBP18.74■□□□□ 0.59
HDAC1-201ENST00000373548 EME2A4GXA9 379 aaPredicted RBP18.73■□□□□ 0.59
HDAC1-201ENST00000373548 OR1F1O43749 312 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 GPR37L1O60883 481 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 SERPINB1P30740 379 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 TFF2Q03403 129 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 NFATC4Q14934 902 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 SLC36A3Q495N2 470 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 LRRC23Q53EV4 343 aaPredicted RBP18.73■□□□□ 0.59
HDAC1-201ENST00000373548 OTUD3Q5T2D3 398 aaPredicted RBP18.73■□□□□ 0.59
HDAC1-201ENST00000373548 CCNYL2Q5T2Q4 361 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 ENPP7Q6UWV6 458 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 PLD3Q8IV08 490 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 EID3Q8N140 333 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 BMFQ96LC9 184 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 MAGED1Q9Y5V3 778 aaPredicted RBP18.73■□□□□ 0.59
HDAC1-201ENST00000373548 TCRBV21S2A2A0A5A6 115 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 LCMT2O60294 686 aaKnown RBP18.73■□□□□ 0.59
HDAC1-201ENST00000373548 NUDT7P0C024 238 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 GABRG2P18507 467 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 NELFEP18615 380 aaKnown RBP18.73■□□□□ 0.59
HDAC1-201ENST00000373548 HOXD11P31277 338 aaPredicted RBP18.73■□□□□ 0.59
HDAC1-201ENST00000373548 IST1P53990 364 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 RGNQ15493 299 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 KRT80Q6KB66 452 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 ZNF852Q6ZMS4 543 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 GALNT10Q86SR1 603 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 ADGRF3Q8IZF5 1079 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 FAM47BQ8NA70 645 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 SAMD4AQ9UPU9 718 aaKnown RBP18.73■□□□□ 0.59
HDAC1-201ENST00000373548 CORO2BQ9UQ03 480 aa18.73■□□□□ 0.59
HDAC1-201ENST00000373548 EYSQ5T1H1 3165 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 A0A1B0GTW7 788 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 PRICKLE3O43900 615 aaPredicted RBP18.72■□□□□ 0.59
HDAC1-201ENST00000373548 PGM3O95394 542 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 NTRK1P04629 796 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 IGFBP4P22692 258 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 KDELR2P33947 212 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 ARSFP54793 590 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 SFSWAPQ12872 951 aaKnown RBP18.72■□□□□ 0.59
HDAC1-201ENST00000373548 CCINQ13939 588 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.72■□□□□ 0.59
HDAC1-201ENST00000373548 ADCK2Q7Z695 626 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 FAM20CQ8IXL6 584 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 SPATA9Q9BWV2 254 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 TTYH1Q9H313 450 aaPredicted RBP18.72■□□□□ 0.59
HDAC1-201ENST00000373548 LHX9Q9NQ69 397 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 PNPLA3Q9NST1 481 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 TBC1D29Q9UFV1 150 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 MMP17Q9ULZ9 603 aa18.72■□□□□ 0.59
HDAC1-201ENST00000373548 NARSO43776 548 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms