RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TRIM25Q14258 630 aaKnown RBP25.11■■□□□ 1.61
ATPAF1-202ENST00000371937 ADPRMQ3LIE5 342 aa25.11■■□□□ 1.61
ATPAF1-202ENST00000371937 PLK5Q496M5 336 aa25.11■■□□□ 1.61
ATPAF1-202ENST00000371937 NELL1Q92832 810 aa25.11■■□□□ 1.61
ATPAF1-202ENST00000371937 TMEM125Q96AQ2 219 aa25.11■■□□□ 1.61
ATPAF1-202ENST00000371937 REEP4Q9H6H4 257 aa25.11■■□□□ 1.61
ATPAF1-202ENST00000371937 UCKL1Q9NWZ5 548 aa25.11■■□□□ 1.61
ATPAF1-202ENST00000371937 CMTM6Q9NX76 183 aa25.11■■□□□ 1.61
ATPAF1-202ENST00000371937 LILRA5A6NI73 299 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 GABRR3A8MPY1 467 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 UBXN7O94888 489 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 HOXB3P14651 431 aaPredicted RBP25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 TCN1P20061 433 aaPredicted RBP25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 GSTM5P46439 218 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 ARRB1P49407 418 aaPredicted RBP25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 TAS2R50P59544 299 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 PLIN5Q00G26 463 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 CYP4F3Q08477 520 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 FLOT2Q14254 428 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 OR4F3Q6IEY1 312 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 TMEM105Q8N8V8 129 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 DTWD2Q8NBA8 298 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 SRFBP1Q8NEF9 429 aaKnown RBP25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 VPS37AQ8NEZ2 397 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 MTERF3Q96E29 417 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 THAP11Q96EK4 314 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 PPM1MQ96MI6 270 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 SLC38A3Q99624 504 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 SORBS1Q9BX66 1292 aaKnown RBP25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 ATP6V1HQ9UI12 483 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 PILRBQ9UKJ0 227 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 SNX11Q9Y5W9 270 aa25.1■■□□□ 1.61
ATPAF1-202ENST00000371937 HSD17B1P14061 328 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 HNRNPFP52597 415 aaKnown RBP25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 MAPK12P53778 367 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 CCDC6Q16204 474 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 OR4C11Q6IEV9 310 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 FAM71E1Q6IPT2 247 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 OR8J3Q8NGG0 315 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 COQ8BQ96D53 544 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 DUSP26Q9BV47 211 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 DDX31Q9H8H2 851 aaKnown RBP25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 RNPEPL1Q9HAU8 725 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 SERHLQ9NQF3 203 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 ATAD3AQ9NVI7 634 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 A0A096LPI6 279 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 RTCAO00442 366 aaKnown RBP25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 MAP3K7O43318 606 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 KLHL18O94889 574 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 TYRP1P17643 537 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 MSX2P35548 267 aaPredicted RBP25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 RXRGP48443 463 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 STXBP1P61764 594 aaKnown RBP25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 C2orf80Q0P641 193 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 LRRC74AQ0VAA2 488 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 TRAP1Q12931 704 aaKnown RBP25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 C14orf28Q4W4Y0 310 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 ANXA8L1Q5VT79 327 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 FCRL6Q6DN72 434 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 FBXO42Q6P3S6 717 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 RSC1A1Q92681 617 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 MS4A6EQ96DS6 147 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 ELF4Q99607 663 aaPredicted RBP25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 SH3GL1Q99961 368 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 TMEM74BQ9NUR3 256 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 POMT2Q9UKY4 750 aa25.09■■□□□ 1.61
ATPAF1-202ENST00000371937 NCOR1O75376 2440 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 HRO43593 1189 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 BCAS2O75934 225 aaPredicted RBP25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 PSMG1O95456 288 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 LAMP1P11279 417 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 PIM1P11309 404 aaPredicted RBP25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 TRPC1P48995 793 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 EEFSECP57772 596 aaKnown RBP25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 RGS1Q08116 209 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 HYAL2Q12891 473 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 RABL3Q5HYI8 236 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 LRIF1Q5T3J3 769 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 UBE3DQ7Z6J8 389 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 FAM156AQ8NDB6 213 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 BAHD1Q8TBE0 780 aaPredicted RBP25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 ANKRD27Q96NW4 1050 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 KCNC2Q96PR1 638 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 LHX9Q9NQ69 397 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 VAPAQ9P0L0 249 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 SH3BP4Q9P0V3 963 aa25.08■■□□□ 1.61
ATPAF1-202ENST00000371937 PRSS51A0A1B0GVH4 220 aa25.07■■□□□ 1.6
ATPAF1-202ENST00000371937 RFXANKO14593 260 aa25.07■■□□□ 1.6
ATPAF1-202ENST00000371937 FKBP6O75344 327 aa25.07■■□□□ 1.6
ATPAF1-202ENST00000371937 SSR2P43308 183 aa25.07■■□□□ 1.6
ATPAF1-202ENST00000371937 TSFMP43897 325 aaKnown RBP25.07■■□□□ 1.6
ATPAF1-202ENST00000371937 PLA2G16P53816 162 aa25.07■■□□□ 1.6
ATPAF1-202ENST00000371937 MS4A2Q01362 244 aa25.07■■□□□ 1.6
ATPAF1-202ENST00000371937 TGM3Q08188 693 aa25.07■■□□□ 1.6
ATPAF1-202ENST00000371937 CCNIQ14094 377 aa25.07■■□□□ 1.6
ATPAF1-202ENST00000371937 DUOXA1Q1HG43 343 aa25.07■■□□□ 1.6
ATPAF1-202ENST00000371937 ASPGQ86U10 573 aa25.07■■□□□ 1.6
ATPAF1-202ENST00000371937 OR2L5Q8NG80 312 aa25.07■■□□□ 1.6
ATPAF1-202ENST00000371937 C17orf62Q9BQA9 187 aa25.07■■□□□ 1.6
ATPAF1-202ENST00000371937 BHLHE41Q9C0J9 482 aaPredicted RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms