RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 PTCHD1Q96NR3 888 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 TSSK3Q96PN8 268 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 MCCC1Q96RQ3 725 aaPredicted RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 PKP4Q99569 1192 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 KCNH6Q9H252 994 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 ZNF395Q9H8N7 513 aaPredicted RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 GID8Q9NWU2 228 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 EMC3Q9P0I2 261 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 TMEM216Q9P0N5 145 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 GIMAP2Q9UG22 337 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 TMPRSS11EQ9UL52 423 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 PADI1Q9ULC6 663 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 ZCWPW2A0A1B0GU75 182 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 A0A1W2PQM1 296 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 ZNF749O43361 778 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 TPBGLP0DKB5 382 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 FOLR1P15328 257 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 ZNF3P17036 446 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 DLSTP36957 453 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 CCNFP41002 786 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 KRT6CP48668 564 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 RAB28P51157 221 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 KPNA2P52292 529 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 XIAPP98170 497 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 LRRC74AQ0VAA2 488 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 NFATC3Q12968 1075 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 SQLEQ14534 574 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 ZC3H12BQ5HYM0 836 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 TCHHL1Q5QJ38 904 aaPredicted RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 METTL2BQ6P1Q9 378 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 PLBD1Q6P4A8 553 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 ZNF704Q6ZNC4 412 aaPredicted RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 ZC3HC1Q86WB0 502 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 SLC38A6Q8IZM9 456 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 FAM9CQ8IZT9 166 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 FAM47BQ8NA70 645 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 ZSCAN1Q8NBB4 408 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 DENND6BQ8NEG7 585 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 WDR36Q8NI36 951 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 TCP10LQ8TDR4 215 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 LRRC8CQ8TDW0 803 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 EXTL1Q92935 676 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 DOCK7Q96N67 2140 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 F2RL3Q96RI0 385 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 KIFC1Q9BW19 673 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 INTS9Q9NV88 658 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 ADAMTS9Q9P2N4 1935 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 A0A1W2PR77 199 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 PSMD11O00231 422 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 PPP6CO00743 305 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 CDH16O75309 829 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 LYPLA1O75608 230 aaPredicted RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 OR4F21O95013 312 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 CPSF4O95639 269 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 PABPC4LP0CB38 370 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 SLC5A2P31639 672 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 ADRA1AP35348 466 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 TRIM23P36406 574 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 NBL1P41271 181 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 KPNB1Q14974 876 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 PGS1Q32NB8 556 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 GLE1Q53GS7 698 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 CYP20A1Q6UW02 462 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 PATL1Q86TB9 770 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 CCDC116Q8IYX3 515 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 SIRT6Q8N6T7 355 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 ATP6V1C2Q8NEY4 427 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 OR2L2Q8NH16 312 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 SMPDL3AQ92484 453 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 EXOSC8Q96B26 276 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 METTL2AQ96IZ6 378 aaKnown RBP6.75□□□□□ -1.33
USP1-202ENST00000371146 COG8Q96MW5 612 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 TMEM74Q96NL1 305 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 KCNA7Q96RP8 456 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 CRB3Q9BUF7 120 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 NLNQ9BYT8 704 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 CHST8Q9H2A9 424 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 BCAP29Q9UHQ4 241 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 ERVK-11Q9UQG0 969 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 SNX5Q9Y5X3 404 aa6.75□□□□□ -1.33
USP1-202ENST00000371146 AKAP13Q12802 2813 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 IGHV1OR21-1A0A087WYE8 117 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 KIR2DS5A0A0G2JLQ3 304 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 A0A0G2JNG1 304 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 E7EQ34 232 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 KIR2DS3K7RE56 304 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 CDC40O60508 579 aaKnown RBP eCLIP6.74□□□□□ -1.33
USP1-202ENST00000371146 GLRA3O75311 464 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 RDH16O75452 317 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 NUDT14O95848 222 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 ENO2P09104 434 aaPredicted RBP6.74□□□□□ -1.33
USP1-202ENST00000371146 LINC00032P0C843 101 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 GABRB3P28472 473 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 IFNA8P32881 189 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 RFC3P40938 356 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 CCR4P51679 360 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 ITIH4Q14624 930 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 KIR2DS5Q14953 304 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 LIN52Q52LA3 116 aa6.74□□□□□ -1.33
USP1-202ENST00000371146 GRTP1Q5TC63 336 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms