RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 FXYD6Q9H0Q3 95 aa21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 TXNRD2Q9NNW7 524 aa21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 DNAJB4Q9UDY4 337 aa21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 ATF4P18848 351 aaPredicted RBP21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 RNF144AP50876 292 aaPredicted RBP21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 ARPC4P59998 168 aa21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 MLLT1Q03111 559 aaPredicted RBP21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 OCLNQ16625 522 aa21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 C2CD4AQ8NCU7 369 aaPredicted RBP21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 LCHNA4D1U4 455 aa21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 FGF18O76093 207 aa21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 FECHP22830 423 aa21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 RBM34P42696 430 aaKnown RBP21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 UAP1L1Q3KQV9 507 aa21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 CYBRD1Q53TN4 286 aa21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 HSPBAP1Q96EW2 488 aa21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 SH3YL1Q96HL8 342 aaPredicted RBP21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 C17orf62Q9BQA9 187 aa21.44■■□□□ 1.02
TM9SF3-201ENST00000371142 OR1E2P47887 323 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 TMED4Q7Z7H5 227 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 EZH1Q92800 747 aaPredicted RBP21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 FBXL18Q96ME1 805 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 B4GALT6Q9UBX8 382 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 IFNA21P01568 189 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 POLR2CP19387 275 aaPredicted RBP21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 FPR1P21462 350 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 MAD2L1BPQ15013 274 aaPredicted RBP21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 SLC15A3Q8IY34 581 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 PQLC3Q8N755 202 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 SMG8Q8ND04 991 aaKnown RBP21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 OR6N1Q8NGY5 312 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 RAB8BQ92930 207 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 TMEM80Q96HE8 168 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 FAM210AQ96ND0 272 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 GRID2O43424 1007 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 CDC40O60508 579 aaKnown RBP eCLIP21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 MAGEA12P43365 314 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 CAPZA1P52907 286 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 ZNF648Q5T619 568 aaPredicted RBP21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 C14orf80Q86SX3 495 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 OR4K1Q8NGD4 311 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 ORAI3Q9BRQ5 295 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 DPAGT1Q9H3H5 408 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 DKKL1Q9UK85 242 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 DLGAP4Q9Y2H0 992 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 KLK3P07288 261 aaPredicted RBP21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 LY6G5CQ5SRR4 150 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 LINC00471Q8N535 108 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 SMURF1Q9HCE7 757 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 PARPBPQ9NWS1 579 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 PIM1P11309 404 aaPredicted RBP21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 VAMP1P23763 118 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 SERINC3Q13530 473 aa21.43■■□□□ 1.02
TM9SF3-201ENST00000371142 NEURL4Q96JN8 1562 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 GADD45AP24522 165 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 ZNF41P51814 821 aaPredicted RBP21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 C12orf40Q86WS4 652 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 DCUN1D3Q8IWE4 304 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 DCAF4L2Q8NA75 395 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 SLC7A6OSQ96CW6 309 aaPredicted RBP21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 C13orf42A0A1B0GVH6 325 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 TRIM64A6NGJ6 449 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 HTR1AP08908 422 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 EMX2Q04743 252 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 ZNF630Q2M218 657 aaPredicted RBP21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 IGDCC3Q8IVU1 814 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 VNN3Q9NY84 501 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 PCDHB14Q9Y5E9 798 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 XPNPEP2O43895 674 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 SLC18A2Q05940 514 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 GPR17Q13304 367 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 SETD7Q8WTS6 366 aaKnown RBP21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 TMEM115Q12893 351 aaPredicted RBP21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 FBXO43Q4G163 708 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 WDR77Q9BQA1 342 aaPredicted RBP21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 WACQ9BTA9 647 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 FBRSL1Q9HCM7 1045 aaKnown RBP21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 MAFFQ9ULX9 164 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 Q9Y3F1 56 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 CYP17A1P05093 508 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 AOC1P19801 751 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 TRIM43Q96BQ3 446 aaPredicted RBP21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 CRTAC1Q9NQ79 661 aa21.42■■□□□ 1.02
TM9SF3-201ENST00000371142 IL33O95760 270 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 PHC1P78364 1004 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 ABHD18Q0P651 414 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 PPP1R3AQ16821 1122 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 SYCE2Q6PIF2 218 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 SLC36A4Q6YBV0 504 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 MRM3Q9HC36 420 aaKnown RBP21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 SRRDQ9UH36 339 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 MLXQ9UH92 298 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 LAMP5Q9UJQ1 280 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 C3P01024 1663 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 EIF5AP63241 154 aaKnown RBP21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 RPL6Q02878 288 aaKnown RBP21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 ANKDD1AQ495B1 522 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 ANO7Q6IWH7 933 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 ERMP1Q7Z2K6 904 aa21.41■■□□□ 1.02
TM9SF3-201ENST00000371142 PLD6Q8N2A8 252 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms