RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 KRT33BQ14525 404 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 GTDC1Q4AE62 458 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 RUNDC3AQ59EK9 446 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 GLYATQ6IB77 296 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 DNAJC14Q6Y2X3 702 aaPredicted RBP16.59■□□□□ 0.25
UBE3D-203ENST00000369747 GKN2Q86XP6 184 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 PAPD5Q8NDF8 572 aaKnown RBP16.59■□□□□ 0.25
UBE3D-203ENST00000369747 OR9A1PQ8NGU1 263 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 SLC37A2Q8TED4 501 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 ZDHHC1Q8WTX9 485 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 MIEF2Q96C03 454 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 MENTQ9BUN1 341 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 PAIP1Q9H074 479 aaKnown RBP16.59■□□□□ 0.25
UBE3D-203ENST00000369747 GAREM1Q9H706 876 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 YY1AP1Q9H869 796 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 ANAPC2Q9UJX6 822 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 RAB23Q9ULC3 237 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 MAN2B2Q9Y2E5 1009 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 PCDH15Q96QU1 1955 aa16.59■□□□□ 0.25
UBE3D-203ENST00000369747 GOLGA4Q13439 2230 aaKnown RBP16.59■□□□□ 0.25
UBE3D-203ENST00000369747 ARID1BQ8NFD5 2236 aaPredicted RBP16.59■□□□□ 0.25
UBE3D-203ENST00000369747 TPST1O60507 370 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 PCSK2P16519 638 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 GGT1P19440 569 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 FASP25445 335 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 S100A3P33764 101 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 CHN2P52757 468 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 TBPL1P62380 186 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 ADNP2Q6IQ32 1131 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 RABEPKQ7Z6M1 372 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 C2orf73Q8N5S3 287 aaPredicted RBP16.58■□□□□ 0.25
UBE3D-203ENST00000369747 NEIL2Q969S2 332 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 CXorf40BQ96DE9 158 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 LOXL4Q96JB6 756 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 CAMK1GQ96NX5 476 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 PDP2Q9P2J9 529 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 CPNE7Q9UBL6 633 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 VPS29Q9UBQ0 182 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 PCDHGB4Q9UN71 923 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 PCDHGB5Q9Y5G0 923 aa16.58■□□□□ 0.25
UBE3D-203ENST00000369747 FAM149AA5PLN7 773 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 LRATO95237 230 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 B3GALT4O96024 378 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 HOXB9P17482 250 aaPredicted RBP16.58■□□□□ 0.24
UBE3D-203ENST00000369747 DDX39BQ13838 428 aaKnown RBP16.58■□□□□ 0.24
UBE3D-203ENST00000369747 LRIF1Q5T3J3 769 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 PPP4R4Q6NUP7 873 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 SLCO4C1Q6ZQN7 724 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 GATAD2AQ86YP4 633 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 SYTL1Q8IYJ3 562 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 OR10A6Q8NH74 314 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 JPH3Q8WXH2 748 aaPredicted RBP16.58■□□□□ 0.24
UBE3D-203ENST00000369747 C11orf24Q96F05 449 aaPredicted RBP16.58■□□□□ 0.24
UBE3D-203ENST00000369747 NSMCE2Q96MF7 247 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 CCDC115Q96NT0 180 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 EBPLQ9BY08 206 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 KCNH6Q9H252 994 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 XKR8Q9H6D3 395 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 MVB12BQ9H7P6 319 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 GPRC5BQ9NZH0 403 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 GMEB2Q9UKD1 530 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 PCDHB14Q9Y5E9 798 aa16.58■□□□□ 0.24
UBE3D-203ENST00000369747 A0A096LPI6 279 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 A0A1B0GTQ1 180 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 SOCS2O14508 198 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 ARHGAP33O14559 1287 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 ERN1O75460 977 aaKnown RBP16.57■□□□□ 0.24
UBE3D-203ENST00000369747 ETHE1O95571 254 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 GIMD1P0DJR0 217 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 HSD3B1P14060 373 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 HSD3B2P26439 372 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 PTPN6P29350 595 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 CCT8P50990 548 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 PGS1Q32NB8 556 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 ZBTB49Q6ZSB9 765 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 EPHX4Q8IUS5 362 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 LRRC56Q8IYG6 542 aaPredicted RBP16.57■□□□□ 0.24
UBE3D-203ENST00000369747 SUMF1Q8NBK3 374 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 OR7G3Q8NG95 312 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 OR52E1Q8NGJ3 308 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 DNAJB8Q8NHS0 232 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 GFM2Q969S9 779 aaKnown RBP16.57■□□□□ 0.24
UBE3D-203ENST00000369747 CENPNQ96H22 339 aaPredicted RBP16.57■□□□□ 0.24
UBE3D-203ENST00000369747 CNBD2Q96M20 576 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 INPP5KQ9BT40 448 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 THUMPD3Q9BV44 507 aaKnown RBP16.57■□□□□ 0.24
UBE3D-203ENST00000369747 SGPP1Q9BX95 441 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 BRF2Q9HAW0 419 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 SH2B3Q9UQQ2 575 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 PCDHGA11Q9Y5H2 935 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 HEBP2Q9Y5Z4 205 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 KCNE2Q9Y6J6 123 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 COLEC10Q9Y6Z7 277 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 SAC3D1A6NKF1 404 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 MAGEB17A8MXT2 336 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 ANXA6P08133 673 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 FCGR1AP12314 374 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 NPPBP16860 134 aa16.57■□□□□ 0.24
UBE3D-203ENST00000369747 EPHA8P29322 1005 aaPredicted RBP16.57■□□□□ 0.24
UBE3D-203ENST00000369747 UBE2IP63279 158 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms