RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 FER1L5A0AVI2 2057 aa13.22□□□□□ -0.29
TPM3-211ENST00000368531 A0A1B0GX78 115 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 LRIT2A6NDA9 550 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 ZNF860A6NHJ4 632 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 ERI3O43414 337 aaKnown RBP13.21□□□□□ -0.29
TPM3-211ENST00000368531 TLX3O43711 291 aaPredicted RBP13.21□□□□□ -0.29
TPM3-211ENST00000368531 KRT6AP02538 564 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 KRT6BP04259 564 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 ENO1P06733 434 aaKnown RBP13.21□□□□□ -0.29
TPM3-211ENST00000368531 CCNYL3P0C7X3 344 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 AGXTP21549 392 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 CD82P27701 267 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 GSTM2P28161 218 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 SLC1A6P48664 564 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 KRT6CP48668 564 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 HTR6P50406 440 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 PLA2G16P53816 162 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 STXBP1P61764 594 aaKnown RBP13.21□□□□□ -0.29
TPM3-211ENST00000368531 BST1Q10588 318 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 DEFB134Q4QY38 66 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 SH2D4BQ5SQS7 431 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 MANEAQ5SRI9 462 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 YOD1Q5VVQ6 348 aaPredicted RBP13.21□□□□□ -0.29
TPM3-211ENST00000368531 UNQ6494/PRO21346Q6UXR6 183 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 CACNA2D3Q8IZS8 1091 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 DSELQ8IZU8 1212 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 NLGN4XQ8N0W4 816 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 IL22RA1Q8N6P7 574 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 NLGN4YQ8NFZ3 816 aaPredicted RBP13.21□□□□□ -0.29
TPM3-211ENST00000368531 OR6Y1Q8NGX8 325 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 UTP15Q8TED0 518 aaKnown RBP13.21□□□□□ -0.29
TPM3-211ENST00000368531 COL26A1Q96A83 441 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 TRMOQ9BU70 441 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 TMEM121BQ9BXQ6 578 aaPredicted RBP13.21□□□□□ -0.29
TPM3-211ENST00000368531 MS4A8Q9BY19 250 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 SLC29A3Q9BZD2 475 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 SLC6A16Q9GZN6 736 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 C20orf27Q9GZN8 174 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 CHST8Q9H2A9 424 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 MANSC1Q9H8J5 431 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 ANKHQ9HCJ1 492 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 ADGRE2Q9UHX3 823 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 PADI1Q9ULC6 663 aa13.21□□□□□ -0.29
TPM3-211ENST00000368531 URADA6NGE7 173 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 TMEM114B3SHH9 223 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 TMEM233B4DJY2 109 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 C4orf51C9J302 202 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 SGK494L7N484 410 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 FOXS1O43638 330 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 ULK1O75385 1050 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 KLHL18O94889 574 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 TBX6O95947 436 aaPredicted RBP13.2□□□□□ -0.3
TPM3-211ENST00000368531 GRK2P25098 689 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 RORAP35398 523 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 PIK3CBP42338 1070 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 GCGRP47871 477 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 RAP1GDS1P52306 607 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 EMP3P54852 163 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 PCBP4P57723 403 aaKnown RBP13.2□□□□□ -0.3
TPM3-211ENST00000368531 OLR1P78380 273 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 BTN3A2P78410 334 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 DCDP81605 110 aaKnown RBP13.2□□□□□ -0.3
TPM3-211ENST00000368531 ABHD18Q0P651 414 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 ARHGAP40Q5TG30 622 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 GARNL3Q5VVW2 1013 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 MLIPQ5VWP3 458 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 CHSY3Q70JA7 882 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 ABHD13Q7L211 337 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 TRIM42Q8IWZ5 723 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 ARHGEF39Q8N4T4 335 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 ESX1Q8N693 406 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 NKD1Q969G9 470 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 MS4A6EQ96DS6 147 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 CMTM7Q96FZ5 175 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 SEC16BQ96JE7 1060 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 DCBLD2Q96PD2 775 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 GBP5Q96PP8 586 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 REXO4Q9GZR2 422 aaKnown RBP13.2□□□□□ -0.3
TPM3-211ENST00000368531 ZNF304Q9HCX3 659 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 LHX9Q9NQ69 397 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 ZDHHC2Q9UIJ5 367 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 NAALAD2Q9Y3Q0 740 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 TRAF6Q9Y4K3 522 aa13.2□□□□□ -0.3
TPM3-211ENST00000368531 RTCAO00442 366 aaKnown RBP13.19□□□□□ -0.3
TPM3-211ENST00000368531 AZIN1O14977 448 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 DNAJB6O75190 326 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 ETHE1O95571 254 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 UROSP10746 265 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 LIPCP11150 499 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 ALOX12P18054 663 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 TCN2P20062 427 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 ITGAXP20702 1163 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 FBLP22087 321 aaKnown RBP13.19□□□□□ -0.3
TPM3-211ENST00000368531 PTX3P26022 381 aaPredicted RBP13.19□□□□□ -0.3
TPM3-211ENST00000368531 SERPINB1P30740 379 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 SERPINB5P36952 375 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 AVPR1BP47901 424 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 MAT1AQ00266 395 aaKnown RBP13.19□□□□□ -0.3
TPM3-211ENST00000368531 FAM53BQ14153 422 aa13.19□□□□□ -0.3
TPM3-211ENST00000368531 ABRAXAS2Q15018 415 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms