RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 LIPJQ5W064 366 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 SMARCD3Q6STE5 483 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 NOL8Q76FK4 1167 aaKnown RBP-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 RRM2BQ7LG56 351 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 TMEM179BQ7Z7N9 219 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 DNAAF5Q86Y56 855 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 MAGEB6Q8N7X4 407 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 Q8N9W7 124 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 KCTD6Q8NC69 237 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 UBALD1Q8TB05 177 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 CCDC107Q8WV48 283 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 CHCHD10Q8WYQ3 142 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 MYDGFQ969H8 173 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 RILPL2Q969X0 211 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 TNFRSF13CQ96RJ3 184 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 BTBD10Q9BSF8 475 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 HGH1Q9BTY7 390 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 TRIM45Q9H8W5 580 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 SAYSD1Q9NPB0 183 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 PRMT7Q9NVM4 692 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 OSER1Q9NX31 292 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 HACD3Q9P035 362 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 RHCGQ9UBD6 479 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 CNOT8Q9UFF9 292 aaKnown RBP-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 GGA2Q9UJY4 613 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 PNMA2Q9UL42 364 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 ERVW-1Q9UQF0 538 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 TRIM17Q9Y577 477 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 SEC16AO15027 2179 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 NEDD4P46934 1319 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 PCDH11YQ9BZA8 1340 aa-0.65□□□□□ -2.51
RNU6-340P-201ENST00000364005 VWDEQ8N2E2 1590 aa-0.66□□□□□ -2.51
RNU6-340P-201ENST00000364005 MYH14Q7Z406 1995 aaKnown RBP-0.66□□□□□ -2.51
RNU6-340P-201ENST00000364005 hCG_38984A0A1B0GV85 526 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 LOC390937A0A1W2PQ73 354 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 EFCAB7A8K855 629 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 VGLL3A8MV65 326 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 RTCAO00442 366 aaKnown RBP-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 ABCD4O14678 606 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 BET1O15155 118 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 NDUFS4O43181 175 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 BAG3O95817 575 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 IGKV1-39P01597 117 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 IGHV3-23P01764 117 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 ANGP03950 147 aaKnown RBP-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 IGKV1D-39P04432 117 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 PCCAP05165 728 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 RHOXF2BP0C7M4 288 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 UQCRFS1P1P0C7P4 283 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 RARGP13631 454 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 MUC1P15941 1255 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 HNF1AP20823 631 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 C4BPBP20851 252 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 GABRR1P24046 479 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 CHMP24386 653 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 CST5P28325 142 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 NMBRP28336 390 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 MSH2P43246 934 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 ALDH3B1P43353 468 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 CTCFP49711 727 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 LHX2P50458 406 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 SNRPEP62304 92 aaKnown RBP-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 PPP2R2BQ00005 443 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 CD47Q08722 323 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 STARD3Q14849 445 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 IRF4Q15306 451 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 CDKN3Q16667 212 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 QRICH1Q2TAL8 776 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 ZNF528Q3MIS6 628 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 PAGE2BQ5JRK9 111 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 SLC10A5Q5PT55 438 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 TEX35Q5T0J7 233 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 NCR3LG1Q68D85 454 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 TATDN1Q6P1N9 297 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 ZNF429Q86V71 674 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 OR2C3Q8N628 320 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 OR10G2Q8NGC3 310 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 OR5M9Q8NGP3 310 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 OR6X1Q8NH79 312 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 PROX1Q92786 737 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 GTF3C6Q969F1 213 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 SDCCAG3Q96C92 435 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 KIF1BPQ96EK5 621 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 ANKRD27Q96NW4 1050 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 RCHY1Q96PM5 261 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 PHF7Q9BWX1 381 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 LIME1Q9H400 295 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 EHD1Q9H4M9 534 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 EGLN3Q9H6Z9 239 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 TBC1D17Q9HA65 648 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 SENP1Q9P0U3 644 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 RCOR3Q9P2K3 495 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 SLC12A6Q9UHW9 1150 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 TMA7Q9Y2S6 64 aaKnown RBP-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 RRP7AQ9Y3A4 280 aaKnown RBP-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 FBXO7Q9Y3I1 522 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 HRNRQ86YZ3 2850 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 IGSF1Q8N6C5 1336 aa-0.66□□□□□ -2.52
RNU6-340P-201ENST00000364005 A0A087WZ39 114 aa-0.67□□□□□ -2.52
RNU6-340P-201ENST00000364005 FSD2A1L4K1 749 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms