RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 VPS29Q9UBQ0 182 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 ARHGEF33A8MVX0 844 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 PDHA2P29803 388 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 AP1S1P61966 158 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 HBA1P69905 142 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 RGNQ15493 299 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 DPY19L3Q6ZPD9 716 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 UBE2J2Q8N2K1 259 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 OR4A15Q8NGL6 344 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 HRASLS5Q96KN8 279 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 NEDD4LQ96PU5 975 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 TSEN34Q9BSV6 310 aaKnown RBP10.18□□□□□ -0.78
SMC3-201ENST00000361804 SLC12A9Q9BXP2 914 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 RPS6KA6Q9UK32 745 aa10.18□□□□□ -0.78
SMC3-201ENST00000361804 CKMP06732 381 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 PRPS1L1P21108 318 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 SOX3P41225 446 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 PIK3CBP42338 1070 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 MTAPQ13126 283 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 DMC1Q14565 340 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 PLEKHG6Q3KR16 790 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 CCBE1Q6UXH8 406 aaPredicted RBP10.17□□□□□ -0.78
SMC3-201ENST00000361804 Q6ZVL8 140 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 GATAD2AQ86YP4 633 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 LGI4Q8N135 537 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 STX19Q8N4C7 294 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 CELF5Q8N6W0 485 aaKnown RBP10.17□□□□□ -0.78
SMC3-201ENST00000361804 PCSK9Q8NBP7 692 aaKnown RBP10.17□□□□□ -0.78
SMC3-201ENST00000361804 B3GNT7Q8NFL0 401 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 DMRTB1Q96MA1 342 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 LINC00597Q9H2U6 94 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 TPK1Q9H3S4 243 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 RDH14Q9HBH5 336 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 SGK2Q9HBY8 427 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 CFAP20Q9Y6A4 193 aaKnown RBP10.17□□□□□ -0.78
SMC3-201ENST00000361804 KPNA5O15131 536 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 C6orf47O95873 294 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 PTGER1P34995 402 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 ETV3P41162 512 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 RPS13P62277 151 aaKnown RBP10.17□□□□□ -0.78
SMC3-201ENST00000361804 TSTQ16762 297 aaKnown RBP10.17□□□□□ -0.78
SMC3-201ENST00000361804 RPS26P11Q5JNZ5 115 aaPredicted RBP10.17□□□□□ -0.78
SMC3-201ENST00000361804 UBE2UQ5VVX9 321 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 Q6ZNB5 142 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 SPRED2Q7Z698 418 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 THOC6Q86W42 341 aaKnown RBP10.17□□□□□ -0.78
SMC3-201ENST00000361804 MEX3DQ86XN8 651 aaKnown RBP10.17□□□□□ -0.78
SMC3-201ENST00000361804 DCAF4L2Q8NA75 395 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 ST13P5Q8NFI4 369 aaPredicted RBP10.17□□□□□ -0.78
SMC3-201ENST00000361804 BRD9Q9H8M2 597 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 EXOSC4Q9NPD3 245 aaKnown RBP10.17□□□□□ -0.78
SMC3-201ENST00000361804 C11orf16Q9NQ32 467 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 CFAP97Q9P2B7 532 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 PCDHB11Q9Y5F2 797 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 DOCK9Q9BZ29 2069 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 NUP210Q8TEM1 1887 aaPredicted RBP10.17□□□□□ -0.78
SMC3-201ENST00000361804 PRAMEF33A0A0G2JMD5 474 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 PRAMEF10O60809 474 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 SLC16A8O95907 504 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 SELPP16109 830 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 PAX3P23760 479 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 PCYT1AP49585 367 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 CTSCP53634 463 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 CPTPQ5TA50 214 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 GPR155Q7Z3F1 870 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 AKAP14Q86UN6 197 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 HHIPQ96QV1 700 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 C2orf49Q9BVC5 232 aaPredicted RBP10.17□□□□□ -0.78
SMC3-201ENST00000361804 CLEC2DQ9UHP7 191 aa10.17□□□□□ -0.78
SMC3-201ENST00000361804 KMOO15229 486 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 KIAA0513O60268 411 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 APOL3O95236 402 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 OLFM2O95897 454 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 TGFB1P01137 390 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 SRCP12931 536 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 CXCR4P61073 352 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 COPZ1P61923 177 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 FAM214AQ32MH5 1076 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 ASTLQ6HA08 431 aaPredicted RBP10.16□□□□□ -0.78
SMC3-201ENST00000361804 PAQR6Q6TCH4 344 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 SLC46A3Q7Z3Q1 461 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 C11orf74Q86VG3 221 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 L3MBTL4Q8NA19 623 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 HJURPQ8NCD3 748 aaPredicted RBP10.16□□□□□ -0.78
SMC3-201ENST00000361804 HUS1BQ8NHY5 278 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 ZNF296Q8WUU4 475 aaPredicted RBP10.16□□□□□ -0.78
SMC3-201ENST00000361804 TRMT61AQ96FX7 289 aaKnown RBP10.16□□□□□ -0.78
SMC3-201ENST00000361804 WFDC6Q9BQY6 131 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 RSPO3Q9BXY4 272 aaPredicted RBP10.16□□□□□ -0.78
SMC3-201ENST00000361804 OR51B5Q9H339 312 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 TP63Q9H3D4 680 aaPredicted RBP10.16□□□□□ -0.78
SMC3-201ENST00000361804 C5AR2Q9P296 337 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 C1orf226A1L170 272 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 CLCA1A8K7I4 914 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 H7C4K7 107 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 CDK1P06493 297 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 JUPP14923 745 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 WEE1P30291 646 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 GGT2P36268 569 aa10.16□□□□□ -0.78
SMC3-201ENST00000361804 TUFMP49411 452 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms