RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 SPATA9Q9BWV2 254 aa6.79□□□□□ -1.32
RAB5B-201ENST00000360299 C6orf62Q9GZU0 229 aaPredicted RBP6.79□□□□□ -1.32
RAB5B-201ENST00000360299 PADI2Q9Y2J8 665 aa6.79□□□□□ -1.32
RAB5B-201ENST00000360299 hCG_2014768A0A024R1R8 64 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 GPR89AB7ZAQ6 455 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 CAPN5O15484 640 aaPredicted RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 SNNO75324 88 aaPredicted RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 GADD45GO95257 159 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 ANGPTL1O95841 491 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 ALPPP05187 535 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 ALOX5P09917 674 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 GPR89BP0CG08 455 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 DHRS4L1P0CG22 281 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 G6PDP11413 515 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 IL7RP16871 459 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 BPIP17213 487 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 BDKRB1P46663 353 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 RPP38P78345 283 aaKnown RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 SCARB2Q14108 478 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 HKDC1Q2TB90 917 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 CDHR3Q6ZTQ4 885 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 MSANTD1Q6ZTZ1 278 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 PLXDC1Q8IUK5 500 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 CNTN4Q8IWV2 1026 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 PJA1Q8NG27 643 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 FCGR1BQ92637 280 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 ZHX1-C8orf76Q96EF9 292 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 SLC35A5Q9BS91 424 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 SLAMF7Q9NQ25 335 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 MAT2BQ9NZL9 334 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 MARCH4Q9P2E8 410 aaPredicted RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 RNF11Q9Y3C5 154 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 LRRC14BA6NHZ5 514 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 LATO43561 262 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 HLA-DQA2P01906 255 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 FGF4P08620 206 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 ENGP17813 658 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 GLDCP23378 1020 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 DNAJA1P31689 397 aaKnown RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 GDF5P43026 501 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 BLVRAP53004 296 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 BNC1Q01954 994 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 RBBP4Q09028 425 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 SLC13A2Q13183 592 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 DAG1Q14118 895 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 TAF13Q15543 124 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 ATG9BQ674R7 924 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 FGD2Q7Z6J4 655 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 VANGL1Q8TAA9 524 aaPredicted RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 PIH1D2Q8WWB5 315 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 KCNH6Q9H252 994 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 SMURF2Q9HAU4 748 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 SLC39A1Q9NY26 324 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 PTGFRNQ9P2B2 879 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 FZD4Q9ULV1 537 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 A8MUA0 341 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 TMEM233B4DJY2 109 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 C9JVG2 144 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 ARPC2O15144 300 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 YKT6O15498 198 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 OR1I1O60431 355 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 UGDHO60701 494 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 KRT33AO76009 404 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 PGM3O95394 542 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 KLK1P06870 262 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 GSTM3P21266 225 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 GSTT1P30711 240 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 HHEXQ03014 270 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 COL9A2Q14055 689 aaPredicted RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 PCBP2Q15366 365 aaKnown RBP eCLIP6.78□□□□□ -1.323e-8■■■■■ 31.4
RAB5B-201ENST00000360299 OR4F3Q6IEY1 312 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 NAPRTQ6XQN6 538 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 OAFQ86UD1 273 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 PMEPA1Q969W9 287 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 METTL2AQ96IZ6 378 aaKnown RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 SLC12A9Q9BXP2 914 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 REEP4Q9H6H4 257 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 ZNF395Q9H8N7 513 aaPredicted RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 E7ENX8 843 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 H7C0S8 307 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 POLR1CO15160 346 aaPredicted RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 NME6O75414 186 aaPredicted RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 PDGFBP01127 241 aaPredicted RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 LYNP07948 512 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 UFM1P61960 85 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 SNAPC1Q16533 368 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 FAM214AQ32MH5 1076 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 CXXC5Q7LFL8 322 aaKnown RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 ISCA2Q86U28 154 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 CEP97Q8IW35 865 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 PHTF2Q8N3S3 785 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 PDPRQ8NCN5 879 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 FAM81AQ8TBF8 368 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 IPCEF1Q8WWN9 437 aaPredicted RBP6.78□□□□□ -1.32
RAB5B-201ENST00000360299 ZNF778Q96MU6 729 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 LDAHQ9H6V9 325 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 TPT1P8Q9HAU6 139 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 SH3BGRL2Q9UJC5 107 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 IRAK3Q9Y616 596 aa6.78□□□□□ -1.32
RAB5B-201ENST00000360299 GOLGA4Q13439 2230 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms