RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 RALYQ9UKM9 306 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 KLK13Q9UKR3 277 aa11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 RUVBL1Q9Y265 456 aaKnown RBP11.82□□□□□ -0.52
NIF3L1-201ENST00000359683 FAM149AA5PLN7 773 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 TMEM8BA6NDV4 472 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 PLD2O14939 933 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 PIP5K1BO14986 540 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 POLR1CO15160 346 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 ETHE1O95571 254 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 JUNP05412 331 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 LINC00032P0C843 101 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 SMIM10L1P0DMW3 83 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 ALOX15P16050 662 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 HNRNPH1P31943 449 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 STXBP1P61764 594 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 BTKQ06187 659 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 TMEM35AQ53FP2 167 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 XKR7Q5GH72 579 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 GARNL3Q5VVW2 1013 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 KHDRBS2Q5VWX1 349 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 TMEM214Q6NUQ4 689 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 CHSY3Q70JA7 882 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 GPR135Q8IZ08 494 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 KDF1Q8NAX2 398 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 ZCCHC14Q8WYQ9 949 aaKnown RBP11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 CCT6BQ92526 530 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 MS4A6EQ96DS6 147 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 SMIM10Q96HG1 83 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 C3orf30Q96M34 536 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 F2RL3Q96RI0 385 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 ACPTQ9BZG2 426 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 OR51B5Q9H339 312 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 KLHL31Q9H511 634 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 APMAPQ9HDC9 416 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 FGFR1OP2Q9NVK5 253 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 NMRK1Q9NWW6 199 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 SLC39A1Q9NY26 324 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 VPS29Q9UBQ0 182 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 NEUROG3Q9Y4Z2 214 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 PTGDR2Q9Y5Y4 395 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 SLC22A7Q9Y694 548 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 USH1CQ9Y6N9 552 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 FAM208BQ5VWN6 2430 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 CFAP47Q6ZTR5 3102 aa11.81□□□□□ -0.52
NIF3L1-201ENST00000359683 HYKKA2RU49 373 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 GMNCA6NCL1 334 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 URADA6NGE7 173 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 SKAP2O75563 359 aaPredicted RBP11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 SEMA3DO95025 777 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 ITIH1P19827 911 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 PRPH2P23942 346 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 ETV5P41161 510 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 ARFIP1P53367 373 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 SEC24CP53992 1094 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 RAB15P59190 212 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 HMGCS1Q01581 520 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 PDCD2Q16342 344 aaPredicted RBP11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 FAM214AQ32MH5 1076 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 TOR1AIP1Q5JTV8 583 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 YOD1Q5VVQ6 348 aaPredicted RBP11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 MAVSQ7Z434 540 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 UBE3DQ7Z6J8 389 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 PPP1R3BQ86XI6 285 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 DDIASQ8IXT1 998 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 UTP15Q8TED0 518 aaKnown RBP11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 C19orf60Q96EN9 201 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 TAAR9Q96RI9 348 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 NUF2Q9BZD4 464 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 REXO4Q9GZR2 422 aaKnown RBP11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 MEAF6Q9HAF1 191 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 SLC12A4Q9UP95 1085 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 PCDHGA8Q9Y5G5 932 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 ZFHX4Q86UP3 3567 aa11.8□□□□□ -0.52
NIF3L1-201ENST00000359683 PMS2P1A4D2B8 440 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 TRPC5OSA6NMA1 111 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 SRRM3A6NNA2 597 aaPredicted RBP11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 ZNF749O43361 778 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 RGS14O43566 566 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 SH3BGRLO75368 114 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 RSL1D1O76021 490 aaKnown RBP11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 MED26O95402 600 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 JMJD7P0C870 316 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 ARSFP54793 590 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 SNRPNP63162 240 aaKnown RBP11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 TBL3Q12788 808 aaKnown RBP11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 FAM53BQ14153 422 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 NDUFA9Q16795 377 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 PRAMEF17Q5VTA0 474 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 CGB2Q6NT52 195 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 PWWP2BQ6NUJ5 590 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 ABHD17CQ6PCB6 329 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 EPGNQ6UW88 154 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 CEACAM20Q6UY09 585 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 MARCH9Q86YJ5 346 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 TTC29Q8NA56 475 aaPredicted RBP11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 SRFBP1Q8NEF9 429 aaKnown RBP11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 OR2L5Q8NG80 312 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 OR2T11Q8NH01 316 aa11.79□□□□□ -0.52
NIF3L1-201ENST00000359683 CHTF18Q8WVB6 975 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms